From 155c2a11854a1dd8a98c55d890c76a419bf0cee8 Mon Sep 17 00:00:00 2001 From: JoseEspinosa Date: Fri, 26 Feb 2021 07:14:29 +0100 Subject: [PATCH] Check only for vcf file to exists (includes cmd) --- tests/software/tiddit/sv/test.yml | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/tests/software/tiddit/sv/test.yml b/tests/software/tiddit/sv/test.yml index 9657b20b..0cf3c8bb 100644 --- a/tests/software/tiddit/sv/test.yml +++ b/tests/software/tiddit/sv/test.yml @@ -10,7 +10,7 @@ - path: output/tiddit/test.signals.tab md5sum: 67e041b737fe0fe1a33119c3109e9eff - path: output/tiddit/test.vcf - md5sum: 24e749d49a2e91acdfb3bc13c1c6e51d + should_exist: true - name: tiddit sv no ref command: nextflow run ./tests/software/tiddit/sv -entry test_tiddit_sv_no_ref -c tests/config/nextflow.config @@ -24,4 +24,4 @@ - path: output/tiddit/test.signals.tab md5sum: 67e041b737fe0fe1a33119c3109e9eff - path: output/tiddit/test.vcf - md5sum: 24e749d49a2e91acdfb3bc13c1c6e51d + should_exist: true