diff --git a/tests/config/pytest_modules.yml b/tests/config/pytest_modules.yml index 287a4555..ebf1c4da 100644 --- a/tests/config/pytest_modules.yml +++ b/tests/config/pytest_modules.yml @@ -1375,11 +1375,6 @@ yara/mapper: - modules/yara/mapper/** - tests/modules/yara/mapper/** -subworkflows/align_bowtie2: - - subworkflows/nf-core/align_bowtie2/** - - tests/subworkflows/nf-core/align_bowtie2/** - - *subworkflows/bam_sort_samtools - subworkflows/bam_stats_samtools: &subworkflows/bam_stats_samtools - subworkflows/nf-core/bam_stats_samtools/** - tests/subworkflows/nf-core/bam_stats_samtools/** @@ -1391,6 +1386,11 @@ subworkflows/bam_sort_samtools: &subworkflows/bam_sort_samtools - *samtools/index - *subworkflows/bam_stats_samtools +subworkflows/align_bowtie2: + - subworkflows/nf-core/align_bowtie2/** + - tests/subworkflows/nf-core/align_bowtie2/** + - *subworkflows/bam_sort_samtools + subworkflows/sra_fastq: - subworkflows/nf-core/sra_fastq/** - tests/subworkflows/nf-core/sra_fastq/**