diff --git a/README.md b/README.md index f82e45f8..e75a039b 100644 --- a/README.md +++ b/README.md @@ -40,7 +40,7 @@ We have written a helper command in the `nf-core/tools` package that uses the Gi 2. List the available modules: ```console - $ nf-core modules list + $ nf-core modules list remote ,--./,-. ___ __ __ __ ___ /,-._.--~\ @@ -65,7 +65,7 @@ We have written a helper command in the `nf-core/tools` package that uses the Gi 3. Install the module in your pipeline directory: ```console - $ nf-core modules install . --tool fastqc + $ nf-core modules install fastqc ,--./,-. ___ __ __ __ ___ /,-._.--~\ @@ -92,7 +92,7 @@ We have written a helper command in the `nf-core/tools` package that uses the Gi 5. Remove the module from the pipeline repository if required: ```console - $ nf-core modules remove . --tool fastqc + $ nf-core modules remove fastqc ,--./,-. ___ __ __ __ ___ /,-._.--~\ @@ -109,7 +109,7 @@ We have written a helper command in the `nf-core/tools` package that uses the Gi 6. Check that a locally installed nf-core module is up-to-date compared to the one hosted in this repo: ```console - $ nf-core modules lint . --tool fastqc + $ nf-core modules lint fastqc ,--./,-. ___ __ __ __ ___ /,-._.--~\