millironx/nf-core_modules
1
0
Fork 0
mirror of https://github.com/MillironX/nf-core_modules.git synced 2024-12-22 02:58:17 +00:00
Code Issues Releases Packages Activity

fixed container definitions

Browse source
This commit is contained in:
Matthias De Smet 2022-05-06 10:44:51 +02:00
parent 77d825e043
commit 1c7205d683
2 changed files with 8 additions and 8 deletions
Show stats Download patch file Download diff file Expand all files Collapse all files

8
modules/md5sum/main.nf
View file

@ -2,10 +2,10 @@ process MD5SUM {
tag "$meta.id"
label 'process_low'
if (params.enable_conda) {
exit 1, "Conda environments cannot be used when using md5sum. Please use docker or singularity containers."
}
container "debian:bullseye-slim"
conda (params.enable_conda ? "conda-forge::coreutils=8.25" : null)
container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?
'https://depot.galaxyproject.org/singularity/coreutils:8.31--h14c3975_0' :
'quay.io/biocontainers/coreutils:8.31--h14c3975_0' }"
input:
tuple val(meta), path(file)

8
modules/shasum/main.nf
View file

@ -2,10 +2,10 @@ process SHASUM {
tag "$meta.id"
label 'process_low'
if (params.enable_conda) {
exit 1, "Conda environments cannot be used when using sha256sum. Please use docker or singularity containers."
}
container "debian:bullseye-slim"
conda (params.enable_conda ? "conda-forge::coreutils=8.25" : null)
container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?
'https://depot.galaxyproject.org/singularity/coreutils:8.31--h14c3975_0' :
'quay.io/biocontainers/coreutils:8.31--h14c3975_0' }"
input:
tuple val(meta), path(file)