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Bump SAMtools version for custom/getchromsizes (#1572)

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Harshil Patel 2022-04-27 18:15:11 +01:00 committed by GitHub
parent 10ca39a86f
commit 2134031879
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1 changed files with 3 additions and 3 deletions
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modules/custom/getchromsizes/main.nf
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@ -2,10 +2,10 @@ process CUSTOM_GETCHROMSIZES {
tag "$fasta" tag "$fasta"
label 'process_low' label 'process_low'
conda (params.enable_conda ? "bioconda::samtools=1.15" : null) conda (params.enable_conda ? "bioconda::samtools=1.15.1" : null)
container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ? container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?
'https://depot.galaxyproject.org/singularity/samtools:1.15--h1170115_1' : 'https://depot.galaxyproject.org/singularity/samtools:1.15.1--h1170115_0' :
'quay.io/biocontainers/samtools:1.15--h1170115_1' }" 'quay.io/biocontainers/samtools:1.15.1--h1170115_0' }"
input: input:
path fasta path fasta