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Update modules/busco/main.nf

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Co-authored-by: Sateesh Peri <33637490+sateeshperi@users.noreply.github.com>
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Mahesh Binzer-Panchal 2022-05-05 16:33:32 +02:00 committed by GitHub
parent 3414d3aba3
commit 2542ae1823
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1 changed files with 4 additions and 4 deletions
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modules/busco/main.nf
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@ -8,10 +8,10 @@ process BUSCO {
'quay.io/biocontainers/busco:5.3.2--pyhdfd78af_0' }" 'quay.io/biocontainers/busco:5.3.2--pyhdfd78af_0' }"
input: input:
tuple val(meta), path(fasta, stageAs: 'tmp_input/*') // Required: meta map, and fasta sequence files tuple val(meta), path('tmp_input/*') // Required: meta map, and fasta sequence files
each lineage // Required: lineage to check against each lineage // Required: lineage to check against
path busco_lineages_path // Recommended: path to busco lineages - downloads if not set path busco_lineages_path // Recommended: path to busco lineages - downloads if not set
path config_file // Optional: busco configuration file path config_file // Optional: busco configuration file
output: output:
tuple val(meta), path("*-busco.batch_summary.txt"), emit: batch_summary tuple val(meta), path("*-busco.batch_summary.txt"), emit: batch_summary