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FIx plasmidid tests for new contigs.fasta file (#438)

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* FIx plasmidid tests for new contigs.fasta file

* Fixing two md5sum hashes
This commit is contained in:
Jose Espinosa-Carrasco 2021-04-13 09:49:44 +02:00 committed by GitHub
parent 1d874bb0d0
commit 26fdebc8de
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1 changed files with 9 additions and 11 deletions
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tests/software/plasmidid/test.yml
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@ -8,31 +8,31 @@
- path: output/plasmidid/test/data/test.coverage_adapted_clustered_ac
md5sum: 3a9ea6d336e113a74d7fdca5e7b623fc
- path: output/plasmidid/test/data/test.err
md5sum: 1eabbbcb19d8886182f78b86fc50884c
md5sum: 011108fd8b0bb4a4c0b5b2cf46452a90
- path: output/plasmidid/test/data/test.fna
md5sum: 78328536870d04afc54a4dfaf103cac8
md5sum: 503a5e1d4654bb2df19420e211070db3
- path: output/plasmidid/test/data/test.gbk
md5sum: acc40ebd7864b84fc14e5ad22e30f83f
md5sum: b52331b77a1a8cc16d88807dba97ba6a
- path: output/plasmidid/test/data/test.gff
md5sum: 0dd7015f77e2fc3ecaa978362f7334cb
md5sum: 3ed8912ee9b0712ca491fa78ff5f4da1
- path: output/plasmidid/test/data/test.karyotype_individual.txt
md5sum: aaf0f5bfe297fb9846ace761ff018d22
- path: output/plasmidid/test/data/test.karyotype_summary.txt
md5sum: aaf0f5bfe297fb9846ace761ff018d22
- path: output/plasmidid/test/data/test.plasmids.blast
md5sum: b089b7a073f4e48fabf0949168581b4c
md5sum: 241045ea62156c1ca9bc1eb734ac9526
- path: output/plasmidid/test/data/test.plasmids.blast.links
md5sum: 3528f4e0a046826a9b7f916838b086c6
md5sum: a44d6aa388b582da8ad53c5b49467b8f
- path: output/plasmidid/test/data/test.plasmids.complete
md5sum: 8d30d205c471ee3c8151b4c3d90e753b
md5sum: fbc7235285dbb963b07561dd6972a883
- path: output/plasmidid/test/database/test.fna
md5sum: 6b843fe652b4369addb382f61952c3dd
- path: output/plasmidid/test/database/test.gbk
md5sum: d2e24369b999bc6a0dae9b7612edb839
md5sum: a059ee355b0b72c5a116bd2a604fddda
- path: output/plasmidid/test/database/test.gff
md5sum: 7e65da147d0a413020b0d92b7b03ffcd
- path: output/plasmidid/test/fasta_files/MT192765.1_term.fasta
md5sum: 2387d7d9c861e6f6e7d9f9395f9bad5c
md5sum: 8a8537dd3b21e6905f9367b51c3b3074
- path: output/plasmidid/test/images/test_individual.circos.conf
md5sum: f74467ab77232e2b342e2bd408897b12
- path: output/plasmidid/test/images/test_MT192765.1_individual.circos.conf
@ -41,8 +41,6 @@
md5sum: e59dc3b77ee610a48b79230da705aba0
- path: output/plasmidid/test/images/test_MT192765.1.png
- path: output/plasmidid/test/images/test_summary.png
- path: output/plasmidid/test/kmer/database.filtered_0.8_term.0.5.clusters.tab
md5sum: cf75e4418631796bb4675129b575915d
- path: output/plasmidid/test/kmer/database.filtered_0.8_term.0.5.clusters.tab
md5sum: cf75e4418631796bb4675129b575915d
- path: output/plasmidid/test/kmer/database.filtered_0.8_term.0.5.representative.fasta