diff --git a/modules/maxquant/lfq/main.nf b/modules/maxquant/lfq/main.nf index 57ab252a..05419d46 100644 --- a/modules/maxquant/lfq/main.nf +++ b/modules/maxquant/lfq/main.nf @@ -1,7 +1,7 @@ process MAXQUANT_LFQ { tag "$meta.id" label 'process_long' - conda (params.enable_conda ? "bioconda::maxquant=2.0.3.0" : null) + conda (params.enable_conda ? "bioconda::maxquant=2.0.3.0=py310hdfd78af_1" : null) if (workflow.containerEngine == 'singularity' && !params.singularity_pull_docker_container) { container "https://depot.galaxyproject.org/singularity/maxquant:2.0.3.0--py310hdfd78af_1" } else { @@ -21,7 +21,6 @@ process MAXQUANT_LFQ { def prefix = task.ext.prefix ?: "${meta.id}" """ - export PATH=/usr/local/lib/dotnet:/usr/local/lib/dotnet/tools:/opt/conda/envs/nf-core-maxquant/bin:/opt/conda/envs/nf-core-maxquant/lib/dotnet/tools:/opt/conda/envs/nf-core-maxquant/lib/dotnet:\$PATH cat <<-END_VERSIONS > versions.yml "${task.process}": maxquant: \$(maxquant --version 2>&1 > /dev/null | cut -f2 -d\" \")