From 28866f3dc714a85fb89e6359b05726f83c4feedb Mon Sep 17 00:00:00 2001 From: Harshil Patel Date: Tue, 9 Feb 2021 21:36:38 +0000 Subject: [PATCH] Update tests/software/bedtools/maskfasta/main.nf --- tests/software/bedtools/maskfasta/main.nf | 7 +++---- 1 file changed, 3 insertions(+), 4 deletions(-) diff --git a/tests/software/bedtools/maskfasta/main.nf b/tests/software/bedtools/maskfasta/main.nf index c0434879..c8f8797b 100644 --- a/tests/software/bedtools/maskfasta/main.nf +++ b/tests/software/bedtools/maskfasta/main.nf @@ -5,10 +5,9 @@ nextflow.enable.dsl = 2 include { BEDTOOLS_MASKFASTA } from '../../../../software/bedtools/maskfasta/main.nf' addParams( options: [:] ) workflow test_bedtools_maskfasta { - def bed,fasta = [] - bed = [ [ id:'test'], - file("${launchDir}/tests/data/bed/C.bed", checkIfExists: true) ] - fasta = [ file("${launchDir}/tests/data/fasta/E_coli/NC_010473.fa", checkIfExists: true) ] + def bed = [ [ id:'test'], + file("${launchDir}/tests/data/bed/C.bed", checkIfExists: true) ] + def fasta = [ file("${launchDir}/tests/data/fasta/E_coli/NC_010473.fa", checkIfExists: true) ] BEDTOOLS_MASKFASTA( bed, fasta ) }