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Update modules/bamtools/split/main.nf

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Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
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Matthias De Smet 2022-04-22 19:36:01 +02:00 committed by GitHub
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commit 2d32267fcd
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1 changed files with 7 additions and 5 deletions
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modules/bamtools/split/main.nf
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@ -24,11 +24,13 @@ process BAMTOOLS_SPLIT {
def stub = !args.contains("-stub") ? "-stub ${prefix}" : ""
"""
bamtools merge \\
${input_list} \\
| bamtools split \\
$stub \\
$args
bamtools \\
merge \\
$input_list \\
| bamtools \\
split \\
-stub $prefix \\
$args
cat <<-END_VERSIONS > versions.yml
"${task.process}":