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Adjust requested ressources for gstama/merge, isoseq3/refine, lima, ultra/align (#1858)

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Reduce requested resources
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Sébastien Guizard 2022-07-07 11:10:18 +01:00 committed by GitHub
parent b02e648c22
commit 2f1eca7467
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4 changed files with 4 additions and 4 deletions
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2
modules/gstama/merge/main.nf
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@ -1,6 +1,6 @@
process GSTAMA_MERGE { process GSTAMA_MERGE {
tag "$meta.id" tag "$meta.id"
label 'process_medium' label 'process_low'
conda (params.enable_conda ? "bioconda::gs-tama=1.0.2" : null) conda (params.enable_conda ? "bioconda::gs-tama=1.0.2" : null)
container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ? container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?

2
modules/isoseq3/refine/main.nf
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@ -1,6 +1,6 @@
process ISOSEQ3_REFINE { process ISOSEQ3_REFINE {
tag "$meta.id" tag "$meta.id"
label 'process_medium' label 'process_low'
conda (params.enable_conda ? "bioconda::isoseq3=3.4.0" : null) conda (params.enable_conda ? "bioconda::isoseq3=3.4.0" : null)
container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ? container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?

2
modules/lima/main.nf
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@ -1,6 +1,6 @@
process LIMA { process LIMA {
tag "$meta.id" tag "$meta.id"
label 'process_medium' label 'process_low'
conda (params.enable_conda ? "bioconda::lima=2.2.0" : null) conda (params.enable_conda ? "bioconda::lima=2.2.0" : null)
container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ? container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?

2
modules/ultra/align/main.nf
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@ -1,6 +1,6 @@
process ULTRA_ALIGN { process ULTRA_ALIGN {
tag "$meta.id" tag "$meta.id"
label 'process_high' label 'process_medium'
conda (params.enable_conda ? "bioconda::ultra_bioinformatics=0.0.4 bioconda::samtools=1.15.1" : null) conda (params.enable_conda ? "bioconda::ultra_bioinformatics=0.0.4 bioconda::samtools=1.15.1" : null)
container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ? container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?