diff --git a/tests/modules/gatk4/cnnscorevariants/main.nf b/tests/modules/gatk4/cnnscorevariants/main.nf
index d03acb78..1654c54a 100644
--- a/tests/modules/gatk4/cnnscorevariants/main.nf
+++ b/tests/modules/gatk4/cnnscorevariants/main.nf
@@ -7,7 +7,8 @@ include { GATK4_CNNSCOREVARIANTS } from '../../../../modules/gatk4/cnnscorevaria
 workflow test_gatk4_cnnscorevariants {
 
     input     = [ [ id:'test' ], // meta map
-                    file(params.test_data['homo_sapiens']['illumina']['test_genome_vcf'], checkIfExists: true),
+                    file(params.test_data['homo_sapiens']['illumina']['test_genome_vcf_gz'], checkIfExists: true),
+                    file(params.test_data['homo_sapiens']['illumina']['test_genome_vcf_gz_tbi'], checkIfExists: true),
                     [],
                     []
                 ]
diff --git a/tests/modules/gatk4/cnnscorevariants/test.yml b/tests/modules/gatk4/cnnscorevariants/test.yml
index 2cbbf5fa..fd3c2b3a 100644
--- a/tests/modules/gatk4/cnnscorevariants/test.yml
+++ b/tests/modules/gatk4/cnnscorevariants/test.yml
@@ -7,3 +7,4 @@
     - path: output/gatk4/test.vcf.gz
       contains:
         - "##ALT=<ID=NON_REF,Description="
+    - path: output/gatk4/test.vcf.gz.tbi