diff --git a/modules/haplocheck/main.nf b/modules/haplocheck/main.nf index f7e145ac..92c6c3b4 100644 --- a/modules/haplocheck/main.nf +++ b/modules/haplocheck/main.nf @@ -8,7 +8,6 @@ process HAPLOCHECK { 'quay.io/biocontainers/haplocheck:1.3.3--h4a94de4_0' }" input: - tuple val(meta), path(vcf) output: diff --git a/modules/haplocheck/meta.yml b/modules/haplocheck/meta.yml index 9d9b1c9e..79da6a40 100644 --- a/modules/haplocheck/meta.yml +++ b/modules/haplocheck/meta.yml @@ -49,7 +49,7 @@ output: - html: type: file description: Haplocheck HTML report - pattern: "*.{txt}" + pattern: "*.{html}" authors: - "@lmtani" diff --git a/tests/modules/haplocheck/test.yml b/tests/modules/haplocheck/test.yml index edfd2aba..4da5365a 100644 --- a/tests/modules/haplocheck/test.yml +++ b/tests/modules/haplocheck/test.yml @@ -1,5 +1,3 @@ -## TODO nf-core: Please run the following command to build this file: -# nf-core modules create-test-yml haplocheck - name: "haplocheck" command: nextflow run ./tests/modules/haplocheck -entry test_haplocheck -c ./tests/config/nextflow.config -c ./tests/modules/haplocheck/nextflow.config tags: