From 3cebcbfc0ae17d3fe026619ee7c0cb1c7c2a665d Mon Sep 17 00:00:00 2001 From: Carpanzano Date: Mon, 2 May 2022 17:13:58 +0200 Subject: [PATCH] remove taxonomy not used in place of db --- tests/modules/krona/ktimporttaxonomy/main.nf | 2 -- 1 file changed, 2 deletions(-) diff --git a/tests/modules/krona/ktimporttaxonomy/main.nf b/tests/modules/krona/ktimporttaxonomy/main.nf index 56ff8ae2..c259a793 100644 --- a/tests/modules/krona/ktimporttaxonomy/main.nf +++ b/tests/modules/krona/ktimporttaxonomy/main.nf @@ -12,7 +12,6 @@ workflow test_krona_ktimporttaxonomy_reads { [ id:'test', single_end:false ], // meta map file(params.test_data['sarscov2']['metagenome']['classified_reads_assignment'], checkIfExists: true) ] - // taxonomy = file(params.test_data['generic']['txt']['hello'], checkIfExists: true) DOWNLOAD_DB() TAXONOMY_READS ( input, DOWNLOAD_DB.out.db ) @@ -24,7 +23,6 @@ workflow test_krona_ktimporttaxonomy_report { [ id:'test', single_end:false ], // meta map file(params.test_data['sarscov2']['metagenome']['report'], checkIfExists: true) ] - taxonomy = file(params.test_data['generic']['txt']['hello'], checkIfExists: true) DOWNLOAD_DB() TAXONOMY_REPORT ( input, DOWNLOAD_DB.out.db )