From 42b8962320078a2dbd1520b2caeffee26caf5c7b Mon Sep 17 00:00:00 2001 From: Edmund Miller Date: Tue, 2 Feb 2021 17:13:35 -0600 Subject: [PATCH] ci: Add bioconda channels --- .github/workflows/pytest-workflow.yml | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/.github/workflows/pytest-workflow.yml b/.github/workflows/pytest-workflow.yml index 965fc8fe..08d70aa2 100644 --- a/.github/workflows/pytest-workflow.yml +++ b/.github/workflows/pytest-workflow.yml @@ -67,11 +67,12 @@ jobs: with: singularity-version: 3.5.3 - - name: Setup conda + - name: Setup miniconda if: matrix.profile == 'conda' uses: conda-incubator/setup-miniconda@v2 with: auto-update-conda: true + channels: defaults, bioconda, conda-forge python-version: ${{ matrix.python-version }} # Test the module