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added quant test workflow
This commit is contained in:
kevinmenden
parent
915e0574a2
commit
431a2eb73b
2 changed files with 98 additions and 574 deletions
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.github/workflows/salmon_quant.yml
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40
.github/workflows/salmon_quant.yml
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name: salmon_quant
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on:
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push:
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paths:
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- software/salmon/quant/**
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- .github/workflows/salmon_quant.yml
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- tests/software/salmon/**
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pull_request:
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paths:
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- software/salmon/quant/**
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- .github/workflows/salmon_quant.yml
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- tests/software/salmon/**
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jobs:
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ci_test:
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runs-on: ubuntu-latest
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strategy:
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matrix:
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nxf_version: [20.11.0-edge]
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env:
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NXF_ANSI_LOG: false
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steps:
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- uses: actions/checkout@v2
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- name: Install Nextflow
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env:
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NXF_VER: ${{ matrix.nxf_version }}
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run: |
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wget -qO- get.nextflow.io | bash
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sudo mv nextflow /usr/local/bin/
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- name: Set up Python
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uses: actions/setup-python@v2
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with:
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python-version: "3.x"
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- name: Install dependencies
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run: python -m pip install --upgrade pip pytest-workflow
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# Test the module
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- run: pytest --tag salmon_quant --symlink --wt 2
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@ -26,308 +26,50 @@
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md5sum: 3f34dca1ec26cdf89a6d19b1d1c07e71
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md5sum: 3f34dca1ec26cdf89a6d19b1d1c07e71
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- name: salmon quant paired end
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- name: salmon quant paired end
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command: nextflow run ./tests/software/salmon -profile docker -entry test_salmon_quant_pe -c tests/config/nextflow.confi
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command: nextflow run ./tests/software/salmon -profile docker -entry test_salmon_quant_pe -c tests/config/nextflow.config
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tags:
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tags:
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- salmon
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- salmon
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- salmon_quant
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- salmon_quant
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- salmon_quant_pe
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- salmon_quant_pe
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files:
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files:
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- path: output/salmon/test/cmd_info.json
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- path: ./output/salmon/test/cmd_info.json
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md5sum: 007676e4d79de0809a03e0ea045ed4a1
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md5sum: 007676e4d79de0809a03e0ea045ed4a1
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- path: output/salmon/test/quant.sf
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- path: ./output/salmon/salmon/refAccumLengths.bin
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md5sum: addb78e233f248b8f62cae3e217bf689
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- path: output/salmon/test/lib_format_counts.json
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md5sum: a8b6e6bfbc28c6e790ddaec559fad9ea
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- path: output/salmon/test/logs/salmon_quant.log
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md5sum: f7fe6e71b4ad4232e217db300c29202b
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- path: output/salmon/test/cmd_info.json
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md5sum: 007676e4d79de0809a03e0ea045ed4a1
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- path: output/salmon/test/quant.sf
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md5sum: addb78e233f248b8f62cae3e217bf689
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- path: output/salmon/test/lib_format_counts.json
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md5sum: a8b6e6bfbc28c6e790ddaec559fad9ea
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- path: output/salmon/test/logs/salmon_quant.log
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md5sum: f7fe6e71b4ad4232e217db300c29202b
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- path: output/salmon/test/aux_info/expected_bias.gz
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md5sum: 24ee10af39b41ecf4f4e08faaaf537ee
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- path: output/salmon/test/aux_info/observed_bias_3p.gz
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md5sum: ef13c06a538e9c34ca9f84212c82f44e
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- path: output/salmon/test/aux_info/meta_info.json
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md5sum: f82491a19755bb1c32d49e9f0e12eebd
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- path: output/salmon/test/aux_info/fld.gz
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md5sum: 7f342560fea53327f0532623e53052f7
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- path: output/salmon/test/aux_info/ambig_info.tsv
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md5sum: 950001575c24fb6bc2c7a6848043b126
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- path: output/salmon/test/aux_info/observed_bias.gz
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md5sum: ef13c06a538e9c34ca9f84212c82f44e
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- path: output/salmon/test/cmd_info.json
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md5sum: 007676e4d79de0809a03e0ea045ed4a1
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- path: output/salmon/test/quant.sf
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md5sum: addb78e233f248b8f62cae3e217bf689
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- path: output/salmon/test/lib_format_counts.json
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md5sum: a8b6e6bfbc28c6e790ddaec559fad9ea
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- path: output/salmon/test/logs/salmon_quant.log
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md5sum: f7fe6e71b4ad4232e217db300c29202b
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- path: output/salmon/test/cmd_info.json
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md5sum: 007676e4d79de0809a03e0ea045ed4a1
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- path: output/salmon/test/quant.sf
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md5sum: addb78e233f248b8f62cae3e217bf689
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- path: output/salmon/test/lib_format_counts.json
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md5sum: a8b6e6bfbc28c6e790ddaec559fad9ea
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- path: output/salmon/test/logs/salmon_quant.log
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md5sum: f7fe6e71b4ad4232e217db300c29202b
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- path: output/salmon/test/aux_info/expected_bias.gz
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md5sum: 24ee10af39b41ecf4f4e08faaaf537ee
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- path: output/salmon/test/aux_info/observed_bias_3p.gz
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md5sum: ef13c06a538e9c34ca9f84212c82f44e
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- path: output/salmon/test/aux_info/meta_info.json
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md5sum: f82491a19755bb1c32d49e9f0e12eebd
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- path: output/salmon/test/aux_info/fld.gz
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md5sum: 7f342560fea53327f0532623e53052f7
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- path: output/salmon/test/aux_info/ambig_info.tsv
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md5sum: 950001575c24fb6bc2c7a6848043b126
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- path: output/salmon/test/aux_info/observed_bias.gz
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md5sum: ef13c06a538e9c34ca9f84212c82f44e
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- path: output/salmon/test/libParams/flenDist.txt
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md5sum: f90c7256c9b18d4131f4d4ecb69d0f55
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- path: output/salmon/test/cmd_info.json
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md5sum: 007676e4d79de0809a03e0ea045ed4a1
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- path: output/salmon/test/quant.sf
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md5sum: addb78e233f248b8f62cae3e217bf689
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- path: output/salmon/test/lib_format_counts.json
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md5sum: a8b6e6bfbc28c6e790ddaec559fad9ea
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- path: output/salmon/test/logs/salmon_quant.log
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md5sum: f7fe6e71b4ad4232e217db300c29202b
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- path: output/salmon/test/cmd_info.json
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md5sum: 007676e4d79de0809a03e0ea045ed4a1
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- path: output/salmon/test/quant.sf
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md5sum: addb78e233f248b8f62cae3e217bf689
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- path: output/salmon/test/lib_format_counts.json
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md5sum: a8b6e6bfbc28c6e790ddaec559fad9ea
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- path: output/salmon/test/logs/salmon_quant.log
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md5sum: f7fe6e71b4ad4232e217db300c29202b
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- path: output/salmon/test/aux_info/expected_bias.gz
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md5sum: 24ee10af39b41ecf4f4e08faaaf537ee
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- path: output/salmon/test/aux_info/observed_bias_3p.gz
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md5sum: ef13c06a538e9c34ca9f84212c82f44e
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||||||
- path: output/salmon/test/aux_info/meta_info.json
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md5sum: f82491a19755bb1c32d49e9f0e12eebd
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- path: output/salmon/test/aux_info/fld.gz
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md5sum: 7f342560fea53327f0532623e53052f7
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||||||
- path: output/salmon/test/aux_info/ambig_info.tsv
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||||||
md5sum: 950001575c24fb6bc2c7a6848043b126
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- path: output/salmon/test/aux_info/observed_bias.gz
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md5sum: ef13c06a538e9c34ca9f84212c82f44e
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- path: output/salmon/test/cmd_info.json
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md5sum: 007676e4d79de0809a03e0ea045ed4a1
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||||||
- path: output/salmon/test/quant.sf
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||||||
md5sum: addb78e233f248b8f62cae3e217bf689
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||||||
- path: output/salmon/test/lib_format_counts.json
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||||||
md5sum: a8b6e6bfbc28c6e790ddaec559fad9ea
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||||||
- path: output/salmon/test/logs/salmon_quant.log
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||||||
md5sum: f7fe6e71b4ad4232e217db300c29202b
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||||||
- path: output/salmon/test/cmd_info.json
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md5sum: 007676e4d79de0809a03e0ea045ed4a1
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||||||
- path: output/salmon/test/quant.sf
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||||||
md5sum: addb78e233f248b8f62cae3e217bf689
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||||||
- path: output/salmon/test/lib_format_counts.json
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md5sum: a8b6e6bfbc28c6e790ddaec559fad9ea
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||||||
- path: output/salmon/test/logs/salmon_quant.log
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||||||
md5sum: f7fe6e71b4ad4232e217db300c29202b
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- path: output/salmon/test/aux_info/expected_bias.gz
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md5sum: 24ee10af39b41ecf4f4e08faaaf537ee
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||||||
- path: output/salmon/test/aux_info/observed_bias_3p.gz
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||||||
md5sum: ef13c06a538e9c34ca9f84212c82f44e
|
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||||||
- path: output/salmon/test/aux_info/meta_info.json
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||||||
md5sum: f82491a19755bb1c32d49e9f0e12eebd
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||||||
- path: output/salmon/test/aux_info/fld.gz
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||||||
md5sum: 7f342560fea53327f0532623e53052f7
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||||||
- path: output/salmon/test/aux_info/ambig_info.tsv
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||||||
md5sum: 950001575c24fb6bc2c7a6848043b126
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- path: output/salmon/test/aux_info/observed_bias.gz
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md5sum: ef13c06a538e9c34ca9f84212c82f44e
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- path: output/salmon/test/libParams/flenDist.txt
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md5sum: f90c7256c9b18d4131f4d4ecb69d0f55
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- path: output/salmon/test/quant.genes.sf
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md5sum: eb3e7b44801a0b3af07c25963927e20d
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- path: output/salmon/salmon/ref_indexing.log
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md5sum: 1f824b721361da702b5b1b1c3b02be49
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- path: output/salmon/salmon/refseq.bin
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md5sum: 79c4ddf34be3a98d5a7b9d153629a6f7
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- path: output/salmon/salmon/versionInfo.json
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md5sum: 204865f645102587c4953fccb256797c
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- path: output/salmon/salmon/complete_ref_lens.bin
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md5sum: f57562f1fca3ae7b133f895ae13c3d08
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- path: output/salmon/salmon/mphf.bin
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md5sum: 53669a47610e33e031faafd32703b714
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- path: output/salmon/salmon/pre_indexing.log
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md5sum: 68f309b5557feb35829b9715b0afad39
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- path: output/salmon/salmon/ctable.bin
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md5sum: 79c06180158c7ee44fab6672c2b27fbb
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- path: output/salmon/salmon/duplicate_clusters.tsv
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md5sum: 51b5292e3a874119c0e1aa566e95d70c
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- path: output/salmon/salmon/reflengths.bin
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md5sum: f57562f1fca3ae7b133f895ae13c3d08
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- path: output/salmon/salmon/info.json
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md5sum: 61ff4d3471134c280668355ddd39e99f
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- path: output/salmon/salmon/refAccumLengths.bin
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md5sum: 8d1970505b2b08ca0eb5ff7722b48cde
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md5sum: 8d1970505b2b08ca0eb5ff7722b48cde
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- path: output/salmon/salmon/ctg_offsets.bin
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- path: ./output/salmon/salmon/complete_ref_lens.bin
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md5sum: 27a76542337df436436e66017f66dd25
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- path: output/salmon/salmon/rank.bin
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md5sum: 3f34dca1ec26cdf89a6d19b1d1c07e71
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- path: output/salmon/salmon/pos.bin
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md5sum: 3b2d741929d6842e7818fcaa16f01bdc
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- path: output/salmon/salmon/seq.bin
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md5sum: 196b06f78c8aa6aa960eb5921288d0f4
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- path: output/salmon/test/cmd_info.json
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md5sum: 007676e4d79de0809a03e0ea045ed4a1
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- path: output/salmon/test/quant.sf
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md5sum: addb78e233f248b8f62cae3e217bf689
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- path: output/salmon/test/lib_format_counts.json
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md5sum: a8b6e6bfbc28c6e790ddaec559fad9ea
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- path: output/salmon/test/logs/salmon_quant.log
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md5sum: f7fe6e71b4ad4232e217db300c29202b
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- path: output/salmon/test/cmd_info.json
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md5sum: 007676e4d79de0809a03e0ea045ed4a1
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- path: output/salmon/test/quant.sf
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md5sum: addb78e233f248b8f62cae3e217bf689
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- path: output/salmon/test/lib_format_counts.json
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md5sum: a8b6e6bfbc28c6e790ddaec559fad9ea
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- path: output/salmon/test/logs/salmon_quant.log
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md5sum: f7fe6e71b4ad4232e217db300c29202b
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- path: output/salmon/test/aux_info/expected_bias.gz
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md5sum: 24ee10af39b41ecf4f4e08faaaf537ee
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- path: output/salmon/test/aux_info/observed_bias_3p.gz
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md5sum: ef13c06a538e9c34ca9f84212c82f44e
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- path: output/salmon/test/aux_info/meta_info.json
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md5sum: f82491a19755bb1c32d49e9f0e12eebd
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- path: output/salmon/test/aux_info/fld.gz
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md5sum: 7f342560fea53327f0532623e53052f7
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- path: output/salmon/test/aux_info/ambig_info.tsv
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md5sum: 950001575c24fb6bc2c7a6848043b126
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- path: output/salmon/test/aux_info/observed_bias.gz
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md5sum: ef13c06a538e9c34ca9f84212c82f44e
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- path: output/salmon/test/cmd_info.json
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md5sum: 007676e4d79de0809a03e0ea045ed4a1
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- path: output/salmon/test/quant.sf
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md5sum: addb78e233f248b8f62cae3e217bf689
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- path: output/salmon/test/lib_format_counts.json
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md5sum: a8b6e6bfbc28c6e790ddaec559fad9ea
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- path: output/salmon/test/logs/salmon_quant.log
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md5sum: f7fe6e71b4ad4232e217db300c29202b
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- path: output/salmon/test/cmd_info.json
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md5sum: 007676e4d79de0809a03e0ea045ed4a1
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- path: output/salmon/test/quant.sf
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md5sum: addb78e233f248b8f62cae3e217bf689
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- path: output/salmon/test/lib_format_counts.json
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md5sum: a8b6e6bfbc28c6e790ddaec559fad9ea
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- path: output/salmon/test/logs/salmon_quant.log
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md5sum: f7fe6e71b4ad4232e217db300c29202b
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- path: output/salmon/test/aux_info/expected_bias.gz
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md5sum: 24ee10af39b41ecf4f4e08faaaf537ee
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- path: output/salmon/test/aux_info/observed_bias_3p.gz
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md5sum: ef13c06a538e9c34ca9f84212c82f44e
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- path: output/salmon/test/aux_info/meta_info.json
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md5sum: f82491a19755bb1c32d49e9f0e12eebd
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- path: output/salmon/test/aux_info/fld.gz
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md5sum: 7f342560fea53327f0532623e53052f7
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- path: output/salmon/test/aux_info/ambig_info.tsv
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md5sum: 950001575c24fb6bc2c7a6848043b126
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- path: output/salmon/test/aux_info/observed_bias.gz
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md5sum: ef13c06a538e9c34ca9f84212c82f44e
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|
||||||
- path: output/salmon/test/libParams/flenDist.txt
|
|
||||||
md5sum: f90c7256c9b18d4131f4d4ecb69d0f55
|
|
||||||
- path: output/salmon/test/cmd_info.json
|
|
||||||
md5sum: 007676e4d79de0809a03e0ea045ed4a1
|
|
||||||
- path: output/salmon/test/quant.sf
|
|
||||||
md5sum: addb78e233f248b8f62cae3e217bf689
|
|
||||||
- path: output/salmon/test/lib_format_counts.json
|
|
||||||
md5sum: a8b6e6bfbc28c6e790ddaec559fad9ea
|
|
||||||
- path: output/salmon/test/logs/salmon_quant.log
|
|
||||||
md5sum: f7fe6e71b4ad4232e217db300c29202b
|
|
||||||
- path: output/salmon/test/cmd_info.json
|
|
||||||
md5sum: 007676e4d79de0809a03e0ea045ed4a1
|
|
||||||
- path: output/salmon/test/quant.sf
|
|
||||||
md5sum: addb78e233f248b8f62cae3e217bf689
|
|
||||||
- path: output/salmon/test/lib_format_counts.json
|
|
||||||
md5sum: a8b6e6bfbc28c6e790ddaec559fad9ea
|
|
||||||
- path: output/salmon/test/logs/salmon_quant.log
|
|
||||||
md5sum: f7fe6e71b4ad4232e217db300c29202b
|
|
||||||
- path: output/salmon/test/aux_info/expected_bias.gz
|
|
||||||
md5sum: 24ee10af39b41ecf4f4e08faaaf537ee
|
|
||||||
- path: output/salmon/test/aux_info/observed_bias_3p.gz
|
|
||||||
md5sum: ef13c06a538e9c34ca9f84212c82f44e
|
|
||||||
- path: output/salmon/test/aux_info/meta_info.json
|
|
||||||
md5sum: f82491a19755bb1c32d49e9f0e12eebd
|
|
||||||
- path: output/salmon/test/aux_info/fld.gz
|
|
||||||
md5sum: 7f342560fea53327f0532623e53052f7
|
|
||||||
- path: output/salmon/test/aux_info/ambig_info.tsv
|
|
||||||
md5sum: 950001575c24fb6bc2c7a6848043b126
|
|
||||||
- path: output/salmon/test/aux_info/observed_bias.gz
|
|
||||||
md5sum: ef13c06a538e9c34ca9f84212c82f44e
|
|
||||||
- path: output/salmon/test/cmd_info.json
|
|
||||||
md5sum: 007676e4d79de0809a03e0ea045ed4a1
|
|
||||||
- path: output/salmon/test/quant.sf
|
|
||||||
md5sum: addb78e233f248b8f62cae3e217bf689
|
|
||||||
- path: output/salmon/test/lib_format_counts.json
|
|
||||||
md5sum: a8b6e6bfbc28c6e790ddaec559fad9ea
|
|
||||||
- path: output/salmon/test/logs/salmon_quant.log
|
|
||||||
md5sum: f7fe6e71b4ad4232e217db300c29202b
|
|
||||||
- path: output/salmon/test/cmd_info.json
|
|
||||||
md5sum: 007676e4d79de0809a03e0ea045ed4a1
|
|
||||||
- path: output/salmon/test/quant.sf
|
|
||||||
md5sum: addb78e233f248b8f62cae3e217bf689
|
|
||||||
- path: output/salmon/test/lib_format_counts.json
|
|
||||||
md5sum: a8b6e6bfbc28c6e790ddaec559fad9ea
|
|
||||||
- path: output/salmon/test/logs/salmon_quant.log
|
|
||||||
md5sum: f7fe6e71b4ad4232e217db300c29202b
|
|
||||||
- path: output/salmon/test/aux_info/expected_bias.gz
|
|
||||||
md5sum: 24ee10af39b41ecf4f4e08faaaf537ee
|
|
||||||
- path: output/salmon/test/aux_info/observed_bias_3p.gz
|
|
||||||
md5sum: ef13c06a538e9c34ca9f84212c82f44e
|
|
||||||
- path: output/salmon/test/aux_info/meta_info.json
|
|
||||||
md5sum: f82491a19755bb1c32d49e9f0e12eebd
|
|
||||||
- path: output/salmon/test/aux_info/fld.gz
|
|
||||||
md5sum: 7f342560fea53327f0532623e53052f7
|
|
||||||
- path: output/salmon/test/aux_info/ambig_info.tsv
|
|
||||||
md5sum: 950001575c24fb6bc2c7a6848043b126
|
|
||||||
- path: output/salmon/test/aux_info/observed_bias.gz
|
|
||||||
md5sum: ef13c06a538e9c34ca9f84212c82f44e
|
|
||||||
- path: output/salmon/test/libParams/flenDist.txt
|
|
||||||
md5sum: f90c7256c9b18d4131f4d4ecb69d0f55
|
|
||||||
- path: output/salmon/test/quant.genes.sf
|
|
||||||
md5sum: eb3e7b44801a0b3af07c25963927e20d
|
|
||||||
- path: output/salmon/salmon/ref_indexing.log
|
|
||||||
md5sum: 1f824b721361da702b5b1b1c3b02be49
|
|
||||||
- path: output/salmon/salmon/refseq.bin
|
|
||||||
md5sum: 79c4ddf34be3a98d5a7b9d153629a6f7
|
|
||||||
- path: output/salmon/salmon/versionInfo.json
|
|
||||||
md5sum: 204865f645102587c4953fccb256797c
|
|
||||||
- path: output/salmon/salmon/complete_ref_lens.bin
|
|
||||||
md5sum: f57562f1fca3ae7b133f895ae13c3d08
|
md5sum: f57562f1fca3ae7b133f895ae13c3d08
|
||||||
- path: output/salmon/salmon/mphf.bin
|
- path: ./output/salmon/test/aux_info/expected_bias.gz
|
||||||
md5sum: 53669a47610e33e031faafd32703b714
|
md5sum: 24ee10af39b41ecf4f4e08faaaf537ee
|
||||||
- path: output/salmon/salmon/pre_indexing.log
|
- path: ./output/salmon/salmon/duplicate_clusters.tsv
|
||||||
md5sum: 68f309b5557feb35829b9715b0afad39
|
|
||||||
- path: output/salmon/salmon/ctable.bin
|
|
||||||
md5sum: 79c06180158c7ee44fab6672c2b27fbb
|
|
||||||
- path: output/salmon/salmon/duplicate_clusters.tsv
|
|
||||||
md5sum: 51b5292e3a874119c0e1aa566e95d70c
|
md5sum: 51b5292e3a874119c0e1aa566e95d70c
|
||||||
- path: output/salmon/salmon/reflengths.bin
|
- path: ./output/salmon/test/aux_info/observed_bias_3p.gz
|
||||||
md5sum: f57562f1fca3ae7b133f895ae13c3d08
|
md5sum: ef13c06a538e9c34ca9f84212c82f44e
|
||||||
- path: output/salmon/salmon/info.json
|
- path: ./output/salmon/salmon/versionInfo.json
|
||||||
|
md5sum: 204865f645102587c4953fccb256797c
|
||||||
|
- path: ./output/salmon/test/aux_info/observed_bias.gz
|
||||||
|
md5sum: ef13c06a538e9c34ca9f84212c82f44e
|
||||||
|
- path: ./output/salmon/test/quant.genes.sf
|
||||||
|
md5sum: eb3e7b44801a0b3af07c25963927e20d
|
||||||
|
- path: ./output/salmon/salmon/info.json
|
||||||
md5sum: 61ff4d3471134c280668355ddd39e99f
|
md5sum: 61ff4d3471134c280668355ddd39e99f
|
||||||
- path: output/salmon/salmon/refAccumLengths.bin
|
- path: ./output/salmon/salmon/mphf.bin
|
||||||
md5sum: 8d1970505b2b08ca0eb5ff7722b48cde
|
md5sum: 53669a47610e33e031faafd32703b714
|
||||||
- path: output/salmon/salmon/ctg_offsets.bin
|
- path: ./output/salmon/test/aux_info/ambig_info.tsv
|
||||||
|
md5sum: 950001575c24fb6bc2c7a6848043b126
|
||||||
|
- path: ./output/salmon/test/lib_format_counts.json
|
||||||
|
md5sum: a8b6e6bfbc28c6e790ddaec559fad9ea
|
||||||
|
- path: ./output/salmon/salmon/ctg_offsets.bin
|
||||||
md5sum: 27a76542337df436436e66017f66dd25
|
md5sum: 27a76542337df436436e66017f66dd25
|
||||||
- path: output/salmon/salmon/rank.bin
|
- path: ./output/salmon/salmon/reflengths.bin
|
||||||
|
md5sum: f57562f1fca3ae7b133f895ae13c3d08
|
||||||
|
- path: ./output/salmon/test/quant.sf
|
||||||
|
md5sum: addb78e233f248b8f62cae3e217bf689
|
||||||
|
- path: ./output/salmon/test/libParams/flenDist.txt
|
||||||
|
md5sum: f90c7256c9b18d4131f4d4ecb69d0f55
|
||||||
|
- path: ./output/salmon/salmon/refseq.bin
|
||||||
|
md5sum: 79c4ddf34be3a98d5a7b9d153629a6f7
|
||||||
|
- path: ./output/salmon/salmon/rank.bin
|
||||||
md5sum: 3f34dca1ec26cdf89a6d19b1d1c07e71
|
md5sum: 3f34dca1ec26cdf89a6d19b1d1c07e71
|
||||||
- path: output/salmon/salmon/pos.bin
|
|
||||||
md5sum: 3b2d741929d6842e7818fcaa16f01bdc
|
|
||||||
- path: output/salmon/salmon/seq.bin
|
|
||||||
md5sum: 196b06f78c8aa6aa960eb5921288d0f4
|
|
||||||
|
|
||||||
- name: salmon quant single-end
|
- name: salmon quant single-end
|
||||||
command: nextflow run ./tests/software/salmon -profile docker -entry test_salmon_quant_se -c tests/config/nextflow.config
|
command: nextflow run ./tests/software/salmon -profile docker -entry test_salmon_quant_se -c tests/config/nextflow.config
|
||||||
|
|
@ -336,299 +78,41 @@
|
||||||
- salmon_quant
|
- salmon_quant
|
||||||
- salmon_quant_se
|
- salmon_quant_se
|
||||||
files:
|
files:
|
||||||
- path: ./output/salmon/test/cmd_info.json
|
|
||||||
md5sum: d95f9bd2287a55fa44bbd9b9d4c4ff8a
|
|
||||||
- path: ./output/salmon/test/quant.sf
|
|
||||||
md5sum: b08095ac70f89efc3146cdf488d0eb73
|
|
||||||
- path: ./output/salmon/test/lib_format_counts.json
|
|
||||||
md5sum: aca0a40187eb407b1b8fc85c01284583
|
|
||||||
- path: ./output/salmon/test/logs/salmon_quant.log
|
|
||||||
md5sum: 7a41329e3b6cd24d86b8fe13a420d9e8
|
|
||||||
- path: ./output/salmon/test/cmd_info.json
|
|
||||||
md5sum: d95f9bd2287a55fa44bbd9b9d4c4ff8a
|
|
||||||
- path: ./output/salmon/test/quant.sf
|
|
||||||
md5sum: b08095ac70f89efc3146cdf488d0eb73
|
|
||||||
- path: ./output/salmon/test/lib_format_counts.json
|
|
||||||
md5sum: aca0a40187eb407b1b8fc85c01284583
|
|
||||||
- path: ./output/salmon/test/logs/salmon_quant.log
|
|
||||||
md5sum: 7a41329e3b6cd24d86b8fe13a420d9e8
|
|
||||||
- path: ./output/salmon/test/aux_info/expected_bias.gz
|
|
||||||
md5sum: 24ee10af39b41ecf4f4e08faaaf537ee
|
|
||||||
- path: ./output/salmon/test/aux_info/observed_bias_3p.gz
|
|
||||||
md5sum: ef13c06a538e9c34ca9f84212c82f44e
|
|
||||||
- path: ./output/salmon/test/aux_info/meta_info.json
|
|
||||||
md5sum: 73264fdcfdf915a539c308bc68eaf243
|
|
||||||
- path: ./output/salmon/test/aux_info/fld.gz
|
|
||||||
md5sum: b3f48b080ee24668b94a92a9793d766e
|
|
||||||
- path: ./output/salmon/test/aux_info/ambig_info.tsv
|
|
||||||
md5sum: c3306d26186ffe018ad4f19d52256180
|
|
||||||
- path: ./output/salmon/test/aux_info/observed_bias.gz
|
|
||||||
md5sum: ef13c06a538e9c34ca9f84212c82f44e
|
|
||||||
- path: ./output/salmon/test/cmd_info.json
|
|
||||||
md5sum: d95f9bd2287a55fa44bbd9b9d4c4ff8a
|
|
||||||
- path: ./output/salmon/test/quant.sf
|
|
||||||
md5sum: b08095ac70f89efc3146cdf488d0eb73
|
|
||||||
- path: ./output/salmon/test/lib_format_counts.json
|
|
||||||
md5sum: aca0a40187eb407b1b8fc85c01284583
|
|
||||||
- path: ./output/salmon/test/logs/salmon_quant.log
|
|
||||||
md5sum: 7a41329e3b6cd24d86b8fe13a420d9e8
|
|
||||||
- path: ./output/salmon/test/cmd_info.json
|
|
||||||
md5sum: d95f9bd2287a55fa44bbd9b9d4c4ff8a
|
|
||||||
- path: ./output/salmon/test/quant.sf
|
|
||||||
md5sum: b08095ac70f89efc3146cdf488d0eb73
|
|
||||||
- path: ./output/salmon/test/lib_format_counts.json
|
|
||||||
md5sum: aca0a40187eb407b1b8fc85c01284583
|
|
||||||
- path: ./output/salmon/test/logs/salmon_quant.log
|
|
||||||
md5sum: 7a41329e3b6cd24d86b8fe13a420d9e8
|
|
||||||
- path: ./output/salmon/test/aux_info/expected_bias.gz
|
|
||||||
md5sum: 24ee10af39b41ecf4f4e08faaaf537ee
|
|
||||||
- path: ./output/salmon/test/aux_info/observed_bias_3p.gz
|
|
||||||
md5sum: ef13c06a538e9c34ca9f84212c82f44e
|
|
||||||
- path: ./output/salmon/test/aux_info/meta_info.json
|
|
||||||
md5sum: 73264fdcfdf915a539c308bc68eaf243
|
|
||||||
- path: ./output/salmon/test/aux_info/fld.gz
|
|
||||||
md5sum: b3f48b080ee24668b94a92a9793d766e
|
|
||||||
- path: ./output/salmon/test/aux_info/ambig_info.tsv
|
|
||||||
md5sum: c3306d26186ffe018ad4f19d52256180
|
|
||||||
- path: ./output/salmon/test/aux_info/observed_bias.gz
|
|
||||||
md5sum: ef13c06a538e9c34ca9f84212c82f44e
|
|
||||||
- path: ./output/salmon/test/libParams/flenDist.txt
|
|
||||||
md5sum: 2de170bdc9f6fd237d286429b292bb28
|
|
||||||
- path: ./output/salmon/test/cmd_info.json
|
|
||||||
md5sum: d95f9bd2287a55fa44bbd9b9d4c4ff8a
|
|
||||||
- path: ./output/salmon/test/quant.sf
|
|
||||||
md5sum: b08095ac70f89efc3146cdf488d0eb73
|
|
||||||
- path: ./output/salmon/test/lib_format_counts.json
|
|
||||||
md5sum: aca0a40187eb407b1b8fc85c01284583
|
|
||||||
- path: ./output/salmon/test/logs/salmon_quant.log
|
|
||||||
md5sum: 7a41329e3b6cd24d86b8fe13a420d9e8
|
|
||||||
- path: ./output/salmon/test/cmd_info.json
|
|
||||||
md5sum: d95f9bd2287a55fa44bbd9b9d4c4ff8a
|
|
||||||
- path: ./output/salmon/test/quant.sf
|
|
||||||
md5sum: b08095ac70f89efc3146cdf488d0eb73
|
|
||||||
- path: ./output/salmon/test/lib_format_counts.json
|
|
||||||
md5sum: aca0a40187eb407b1b8fc85c01284583
|
|
||||||
- path: ./output/salmon/test/logs/salmon_quant.log
|
|
||||||
md5sum: 7a41329e3b6cd24d86b8fe13a420d9e8
|
|
||||||
- path: ./output/salmon/test/aux_info/expected_bias.gz
|
|
||||||
md5sum: 24ee10af39b41ecf4f4e08faaaf537ee
|
|
||||||
- path: ./output/salmon/test/aux_info/observed_bias_3p.gz
|
|
||||||
md5sum: ef13c06a538e9c34ca9f84212c82f44e
|
|
||||||
- path: ./output/salmon/test/aux_info/meta_info.json
|
|
||||||
md5sum: 73264fdcfdf915a539c308bc68eaf243
|
|
||||||
- path: ./output/salmon/test/aux_info/fld.gz
|
|
||||||
md5sum: b3f48b080ee24668b94a92a9793d766e
|
|
||||||
- path: ./output/salmon/test/aux_info/ambig_info.tsv
|
|
||||||
md5sum: c3306d26186ffe018ad4f19d52256180
|
|
||||||
- path: ./output/salmon/test/aux_info/observed_bias.gz
|
|
||||||
md5sum: ef13c06a538e9c34ca9f84212c82f44e
|
|
||||||
- path: ./output/salmon/test/cmd_info.json
|
|
||||||
md5sum: d95f9bd2287a55fa44bbd9b9d4c4ff8a
|
|
||||||
- path: ./output/salmon/test/quant.sf
|
|
||||||
md5sum: b08095ac70f89efc3146cdf488d0eb73
|
|
||||||
- path: ./output/salmon/test/lib_format_counts.json
|
|
||||||
md5sum: aca0a40187eb407b1b8fc85c01284583
|
|
||||||
- path: ./output/salmon/test/logs/salmon_quant.log
|
|
||||||
md5sum: 7a41329e3b6cd24d86b8fe13a420d9e8
|
|
||||||
- path: ./output/salmon/test/cmd_info.json
|
|
||||||
md5sum: d95f9bd2287a55fa44bbd9b9d4c4ff8a
|
|
||||||
- path: ./output/salmon/test/quant.sf
|
|
||||||
md5sum: b08095ac70f89efc3146cdf488d0eb73
|
|
||||||
- path: ./output/salmon/test/lib_format_counts.json
|
|
||||||
md5sum: aca0a40187eb407b1b8fc85c01284583
|
|
||||||
- path: ./output/salmon/test/logs/salmon_quant.log
|
|
||||||
md5sum: 7a41329e3b6cd24d86b8fe13a420d9e8
|
|
||||||
- path: ./output/salmon/test/aux_info/expected_bias.gz
|
|
||||||
md5sum: 24ee10af39b41ecf4f4e08faaaf537ee
|
|
||||||
- path: ./output/salmon/test/aux_info/observed_bias_3p.gz
|
|
||||||
md5sum: ef13c06a538e9c34ca9f84212c82f44e
|
|
||||||
- path: ./output/salmon/test/aux_info/meta_info.json
|
|
||||||
md5sum: 73264fdcfdf915a539c308bc68eaf243
|
|
||||||
- path: ./output/salmon/test/aux_info/fld.gz
|
|
||||||
md5sum: b3f48b080ee24668b94a92a9793d766e
|
|
||||||
- path: ./output/salmon/test/aux_info/ambig_info.tsv
|
|
||||||
md5sum: c3306d26186ffe018ad4f19d52256180
|
|
||||||
- path: ./output/salmon/test/aux_info/observed_bias.gz
|
|
||||||
md5sum: ef13c06a538e9c34ca9f84212c82f44e
|
|
||||||
- path: ./output/salmon/test/libParams/flenDist.txt
|
|
||||||
md5sum: 2de170bdc9f6fd237d286429b292bb28
|
|
||||||
- path: ./output/salmon/test/quant.genes.sf
|
|
||||||
md5sum: 5b39785b4d8da533c08ee4a6c8bc1211
|
|
||||||
- path: ./output/salmon/salmon/ref_indexing.log
|
|
||||||
md5sum: 09c472422bd4e77a8a03b5296d947f9c
|
|
||||||
- path: ./output/salmon/salmon/refseq.bin
|
|
||||||
md5sum: 79c4ddf34be3a98d5a7b9d153629a6f7
|
|
||||||
- path: ./output/salmon/salmon/versionInfo.json
|
|
||||||
md5sum: 204865f645102587c4953fccb256797c
|
|
||||||
- path: ./output/salmon/salmon/complete_ref_lens.bin
|
|
||||||
md5sum: f57562f1fca3ae7b133f895ae13c3d08
|
|
||||||
- path: ./output/salmon/salmon/mphf.bin
|
|
||||||
md5sum: 53669a47610e33e031faafd32703b714
|
|
||||||
- path: ./output/salmon/salmon/pre_indexing.log
|
|
||||||
md5sum: ea891a7a435745ebcc540740e8cb2f56
|
|
||||||
- path: ./output/salmon/salmon/ctable.bin
|
|
||||||
md5sum: fa76c33c22592a201cbcae299dbf2de6
|
|
||||||
- path: ./output/salmon/salmon/duplicate_clusters.tsv
|
- path: ./output/salmon/salmon/duplicate_clusters.tsv
|
||||||
md5sum: 51b5292e3a874119c0e1aa566e95d70c
|
md5sum: 51b5292e3a874119c0e1aa566e95d70c
|
||||||
|
- path: ./output/salmon/test/quant.genes.sf
|
||||||
|
md5sum: 5b39785b4d8da533c08ee4a6c8bc1211
|
||||||
|
- path: ./output/salmon/test/aux_info/observed_bias_3p.gz
|
||||||
|
md5sum: ef13c06a538e9c34ca9f84212c82f44e
|
||||||
|
- path: ./output/salmon/salmon/refseq.bin
|
||||||
|
md5sum: 79c4ddf34be3a98d5a7b9d153629a6f7
|
||||||
|
- path: ./output/salmon/salmon/complete_ref_lens.bin
|
||||||
|
md5sum: f57562f1fca3ae7b133f895ae13c3d08
|
||||||
|
- path: ./output/salmon/test/lib_format_counts.json
|
||||||
|
md5sum: aca0a40187eb407b1b8fc85c01284583
|
||||||
|
- path: ./output/salmon/test/libParams/flenDist.txt
|
||||||
|
md5sum: 2de170bdc9f6fd237d286429b292bb28
|
||||||
|
- path: ./output/salmon/test/aux_info/expected_bias.gz
|
||||||
|
md5sum: 24ee10af39b41ecf4f4e08faaaf537ee
|
||||||
|
- path: ./output/salmon/salmon/rank.bin
|
||||||
|
md5sum: 3f34dca1ec26cdf89a6d19b1d1c07e71
|
||||||
|
- path: ./output/salmon/test/aux_info/observed_bias.gz
|
||||||
|
md5sum: ef13c06a538e9c34ca9f84212c82f44e
|
||||||
|
- path: ./output/salmon/test/cmd_info.json
|
||||||
|
md5sum: d95f9bd2287a55fa44bbd9b9d4c4ff8a
|
||||||
|
- path: ./output/salmon/salmon/refAccumLengths.bin
|
||||||
|
md5sum: 8d1970505b2b08ca0eb5ff7722b48cde
|
||||||
|
- path: ./output/salmon/test/aux_info/ambig_info.tsv
|
||||||
|
md5sum: c3306d26186ffe018ad4f19d52256180
|
||||||
- path: ./output/salmon/salmon/reflengths.bin
|
- path: ./output/salmon/salmon/reflengths.bin
|
||||||
md5sum: f57562f1fca3ae7b133f895ae13c3d08
|
md5sum: f57562f1fca3ae7b133f895ae13c3d08
|
||||||
- path: ./output/salmon/salmon/info.json
|
- path: ./output/salmon/salmon/info.json
|
||||||
md5sum: 61ff4d3471134c280668355ddd39e99f
|
md5sum: 61ff4d3471134c280668355ddd39e99f
|
||||||
- path: ./output/salmon/salmon/refAccumLengths.bin
|
|
||||||
md5sum: 8d1970505b2b08ca0eb5ff7722b48cde
|
|
||||||
- path: ./output/salmon/salmon/ctg_offsets.bin
|
|
||||||
md5sum: 27a76542337df436436e66017f66dd25
|
|
||||||
- path: ./output/salmon/salmon/rank.bin
|
|
||||||
md5sum: 3f34dca1ec26cdf89a6d19b1d1c07e71
|
|
||||||
- path: ./output/salmon/salmon/pos.bin
|
|
||||||
md5sum: f8e96e67430eac6945ecdecf73d0c025
|
|
||||||
- path: ./output/salmon/salmon/seq.bin
|
|
||||||
md5sum: a64df36de51fc94ab8f707be98c91062
|
|
||||||
- path: ./output/salmon/test/cmd_info.json
|
|
||||||
md5sum: d95f9bd2287a55fa44bbd9b9d4c4ff8a
|
|
||||||
- path: ./output/salmon/test/quant.sf
|
|
||||||
md5sum: b08095ac70f89efc3146cdf488d0eb73
|
|
||||||
- path: ./output/salmon/test/lib_format_counts.json
|
|
||||||
md5sum: aca0a40187eb407b1b8fc85c01284583
|
|
||||||
- path: ./output/salmon/test/logs/salmon_quant.log
|
|
||||||
md5sum: 7a41329e3b6cd24d86b8fe13a420d9e8
|
|
||||||
- path: ./output/salmon/test/cmd_info.json
|
|
||||||
md5sum: d95f9bd2287a55fa44bbd9b9d4c4ff8a
|
|
||||||
- path: ./output/salmon/test/quant.sf
|
|
||||||
md5sum: b08095ac70f89efc3146cdf488d0eb73
|
|
||||||
- path: ./output/salmon/test/lib_format_counts.json
|
|
||||||
md5sum: aca0a40187eb407b1b8fc85c01284583
|
|
||||||
- path: ./output/salmon/test/logs/salmon_quant.log
|
|
||||||
md5sum: 7a41329e3b6cd24d86b8fe13a420d9e8
|
|
||||||
- path: ./output/salmon/test/aux_info/expected_bias.gz
|
|
||||||
md5sum: 24ee10af39b41ecf4f4e08faaaf537ee
|
|
||||||
- path: ./output/salmon/test/aux_info/observed_bias_3p.gz
|
|
||||||
md5sum: ef13c06a538e9c34ca9f84212c82f44e
|
|
||||||
- path: ./output/salmon/test/aux_info/meta_info.json
|
|
||||||
md5sum: 73264fdcfdf915a539c308bc68eaf243
|
|
||||||
- path: ./output/salmon/test/aux_info/fld.gz
|
|
||||||
md5sum: b3f48b080ee24668b94a92a9793d766e
|
|
||||||
- path: ./output/salmon/test/aux_info/ambig_info.tsv
|
|
||||||
md5sum: c3306d26186ffe018ad4f19d52256180
|
|
||||||
- path: ./output/salmon/test/aux_info/observed_bias.gz
|
|
||||||
md5sum: ef13c06a538e9c34ca9f84212c82f44e
|
|
||||||
- path: ./output/salmon/test/cmd_info.json
|
|
||||||
md5sum: d95f9bd2287a55fa44bbd9b9d4c4ff8a
|
|
||||||
- path: ./output/salmon/test/quant.sf
|
|
||||||
md5sum: b08095ac70f89efc3146cdf488d0eb73
|
|
||||||
- path: ./output/salmon/test/lib_format_counts.json
|
|
||||||
md5sum: aca0a40187eb407b1b8fc85c01284583
|
|
||||||
- path: ./output/salmon/test/logs/salmon_quant.log
|
|
||||||
md5sum: 7a41329e3b6cd24d86b8fe13a420d9e8
|
|
||||||
- path: ./output/salmon/test/cmd_info.json
|
|
||||||
md5sum: d95f9bd2287a55fa44bbd9b9d4c4ff8a
|
|
||||||
- path: ./output/salmon/test/quant.sf
|
|
||||||
md5sum: b08095ac70f89efc3146cdf488d0eb73
|
|
||||||
- path: ./output/salmon/test/lib_format_counts.json
|
|
||||||
md5sum: aca0a40187eb407b1b8fc85c01284583
|
|
||||||
- path: ./output/salmon/test/logs/salmon_quant.log
|
|
||||||
md5sum: 7a41329e3b6cd24d86b8fe13a420d9e8
|
|
||||||
- path: ./output/salmon/test/aux_info/expected_bias.gz
|
|
||||||
md5sum: 24ee10af39b41ecf4f4e08faaaf537ee
|
|
||||||
- path: ./output/salmon/test/aux_info/observed_bias_3p.gz
|
|
||||||
md5sum: ef13c06a538e9c34ca9f84212c82f44e
|
|
||||||
- path: ./output/salmon/test/aux_info/meta_info.json
|
|
||||||
md5sum: 73264fdcfdf915a539c308bc68eaf243
|
|
||||||
- path: ./output/salmon/test/aux_info/fld.gz
|
|
||||||
md5sum: b3f48b080ee24668b94a92a9793d766e
|
|
||||||
- path: ./output/salmon/test/aux_info/ambig_info.tsv
|
|
||||||
md5sum: c3306d26186ffe018ad4f19d52256180
|
|
||||||
- path: ./output/salmon/test/aux_info/observed_bias.gz
|
|
||||||
md5sum: ef13c06a538e9c34ca9f84212c82f44e
|
|
||||||
- path: ./output/salmon/test/libParams/flenDist.txt
|
|
||||||
md5sum: 2de170bdc9f6fd237d286429b292bb28
|
|
||||||
- path: ./output/salmon/test/cmd_info.json
|
|
||||||
md5sum: d95f9bd2287a55fa44bbd9b9d4c4ff8a
|
|
||||||
- path: ./output/salmon/test/quant.sf
|
|
||||||
md5sum: b08095ac70f89efc3146cdf488d0eb73
|
|
||||||
- path: ./output/salmon/test/lib_format_counts.json
|
|
||||||
md5sum: aca0a40187eb407b1b8fc85c01284583
|
|
||||||
- path: ./output/salmon/test/logs/salmon_quant.log
|
|
||||||
md5sum: 7a41329e3b6cd24d86b8fe13a420d9e8
|
|
||||||
- path: ./output/salmon/test/cmd_info.json
|
|
||||||
md5sum: d95f9bd2287a55fa44bbd9b9d4c4ff8a
|
|
||||||
- path: ./output/salmon/test/quant.sf
|
|
||||||
md5sum: b08095ac70f89efc3146cdf488d0eb73
|
|
||||||
- path: ./output/salmon/test/lib_format_counts.json
|
|
||||||
md5sum: aca0a40187eb407b1b8fc85c01284583
|
|
||||||
- path: ./output/salmon/test/logs/salmon_quant.log
|
|
||||||
md5sum: 7a41329e3b6cd24d86b8fe13a420d9e8
|
|
||||||
- path: ./output/salmon/test/aux_info/expected_bias.gz
|
|
||||||
md5sum: 24ee10af39b41ecf4f4e08faaaf537ee
|
|
||||||
- path: ./output/salmon/test/aux_info/observed_bias_3p.gz
|
|
||||||
md5sum: ef13c06a538e9c34ca9f84212c82f44e
|
|
||||||
- path: ./output/salmon/test/aux_info/meta_info.json
|
|
||||||
md5sum: 73264fdcfdf915a539c308bc68eaf243
|
|
||||||
- path: ./output/salmon/test/aux_info/fld.gz
|
|
||||||
md5sum: b3f48b080ee24668b94a92a9793d766e
|
|
||||||
- path: ./output/salmon/test/aux_info/ambig_info.tsv
|
|
||||||
md5sum: c3306d26186ffe018ad4f19d52256180
|
|
||||||
- path: ./output/salmon/test/aux_info/observed_bias.gz
|
|
||||||
md5sum: ef13c06a538e9c34ca9f84212c82f44e
|
|
||||||
- path: ./output/salmon/test/cmd_info.json
|
|
||||||
md5sum: d95f9bd2287a55fa44bbd9b9d4c4ff8a
|
|
||||||
- path: ./output/salmon/test/quant.sf
|
|
||||||
md5sum: b08095ac70f89efc3146cdf488d0eb73
|
|
||||||
- path: ./output/salmon/test/lib_format_counts.json
|
|
||||||
md5sum: aca0a40187eb407b1b8fc85c01284583
|
|
||||||
- path: ./output/salmon/test/logs/salmon_quant.log
|
|
||||||
md5sum: 7a41329e3b6cd24d86b8fe13a420d9e8
|
|
||||||
- path: ./output/salmon/test/cmd_info.json
|
|
||||||
md5sum: d95f9bd2287a55fa44bbd9b9d4c4ff8a
|
|
||||||
- path: ./output/salmon/test/quant.sf
|
|
||||||
md5sum: b08095ac70f89efc3146cdf488d0eb73
|
|
||||||
- path: ./output/salmon/test/lib_format_counts.json
|
|
||||||
md5sum: aca0a40187eb407b1b8fc85c01284583
|
|
||||||
- path: ./output/salmon/test/logs/salmon_quant.log
|
|
||||||
md5sum: 7a41329e3b6cd24d86b8fe13a420d9e8
|
|
||||||
- path: ./output/salmon/test/aux_info/expected_bias.gz
|
|
||||||
md5sum: 24ee10af39b41ecf4f4e08faaaf537ee
|
|
||||||
- path: ./output/salmon/test/aux_info/observed_bias_3p.gz
|
|
||||||
md5sum: ef13c06a538e9c34ca9f84212c82f44e
|
|
||||||
- path: ./output/salmon/test/aux_info/meta_info.json
|
|
||||||
md5sum: 73264fdcfdf915a539c308bc68eaf243
|
|
||||||
- path: ./output/salmon/test/aux_info/fld.gz
|
|
||||||
md5sum: b3f48b080ee24668b94a92a9793d766e
|
|
||||||
- path: ./output/salmon/test/aux_info/ambig_info.tsv
|
|
||||||
md5sum: c3306d26186ffe018ad4f19d52256180
|
|
||||||
- path: ./output/salmon/test/aux_info/observed_bias.gz
|
|
||||||
md5sum: ef13c06a538e9c34ca9f84212c82f44e
|
|
||||||
- path: ./output/salmon/test/libParams/flenDist.txt
|
|
||||||
md5sum: 2de170bdc9f6fd237d286429b292bb28
|
|
||||||
- path: ./output/salmon/test/quant.genes.sf
|
|
||||||
md5sum: 5b39785b4d8da533c08ee4a6c8bc1211
|
|
||||||
- path: ./output/salmon/salmon/ref_indexing.log
|
|
||||||
md5sum: 09c472422bd4e77a8a03b5296d947f9c
|
|
||||||
- path: ./output/salmon/salmon/refseq.bin
|
|
||||||
md5sum: 79c4ddf34be3a98d5a7b9d153629a6f7
|
|
||||||
- path: ./output/salmon/salmon/versionInfo.json
|
- path: ./output/salmon/salmon/versionInfo.json
|
||||||
md5sum: 204865f645102587c4953fccb256797c
|
md5sum: 204865f645102587c4953fccb256797c
|
||||||
- path: ./output/salmon/salmon/complete_ref_lens.bin
|
|
||||||
md5sum: f57562f1fca3ae7b133f895ae13c3d08
|
|
||||||
- path: ./output/salmon/salmon/mphf.bin
|
- path: ./output/salmon/salmon/mphf.bin
|
||||||
md5sum: 53669a47610e33e031faafd32703b714
|
md5sum: 53669a47610e33e031faafd32703b714
|
||||||
- path: ./output/salmon/salmon/pre_indexing.log
|
|
||||||
md5sum: ea891a7a435745ebcc540740e8cb2f56
|
|
||||||
- path: ./output/salmon/salmon/ctable.bin
|
|
||||||
md5sum: fa76c33c22592a201cbcae299dbf2de6
|
|
||||||
- path: ./output/salmon/salmon/duplicate_clusters.tsv
|
|
||||||
md5sum: 51b5292e3a874119c0e1aa566e95d70c
|
|
||||||
- path: ./output/salmon/salmon/reflengths.bin
|
|
||||||
md5sum: f57562f1fca3ae7b133f895ae13c3d08
|
|
||||||
- path: ./output/salmon/salmon/info.json
|
|
||||||
md5sum: 61ff4d3471134c280668355ddd39e99f
|
|
||||||
- path: ./output/salmon/salmon/refAccumLengths.bin
|
|
||||||
md5sum: 8d1970505b2b08ca0eb5ff7722b48cde
|
|
||||||
- path: ./output/salmon/salmon/ctg_offsets.bin
|
- path: ./output/salmon/salmon/ctg_offsets.bin
|
||||||
md5sum: 27a76542337df436436e66017f66dd25
|
md5sum: 27a76542337df436436e66017f66dd25
|
||||||
- path: ./output/salmon/salmon/rank.bin
|
- path: ./output/salmon/test/quant.sf
|
||||||
md5sum: 3f34dca1ec26cdf89a6d19b1d1c07e71
|
md5sum: b08095ac70f89efc3146cdf488d0eb73
|
||||||
- path: ./output/salmon/salmon/pos.bin
|
|
||||||
md5sum: f8e96e67430eac6945ecdecf73d0c025
|
|
||||||
- path: ./output/salmon/salmon/seq.bin
|
|
||||||
md5sum: a64df36de51fc94ab8f707be98c91062
|
|
||||||
|
|
|
||||||
Loading…
Reference in a new issue