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Update trimgalore version

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drpatelh 2020-10-12 15:59:46 +01:00
parent d19a8c702d
commit 436a1f983c
1 changed files with 3 additions and 3 deletions
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software/trimgalore/main.nf
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@ -8,10 +8,10 @@ process TRIMGALORE {
mode: params.publish_dir_mode, mode: params.publish_dir_mode,
saveAs: { filename -> saveFiles(filename:filename, options:options, publish_dir:getSoftwareName(task.process), publish_id:meta.id) } saveAs: { filename -> saveFiles(filename:filename, options:options, publish_dir:getSoftwareName(task.process), publish_id:meta.id) }
container "quay.io/biocontainers/trim-galore:0.6.5--0" container "quay.io/biocontainers/trim-galore:0.6.6--0"
//container "https://depot.galaxyproject.org/singularity/trim-galore:0.6.5--0" //container "https://depot.galaxyproject.org/singularity/trim-galore:0.6.6--0"
conda (params.conda ? "bioconda::trim-galore=0.6.5" : null) conda (params.conda ? "bioconda::trim-galore=0.6.6" : null)
input: input:
tuple val(meta), path(reads) tuple val(meta), path(reads)