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Add nextflow.config
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parent
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commit
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2 changed files with 19 additions and 5 deletions
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@ -2,10 +2,6 @@
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nextflow.enable.dsl = 2
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nextflow.enable.dsl = 2
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params.outdir = "output/"
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params.publish_dir_mode = "copy"
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params.conda = false
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include { FASTQC } from '../main.nf'
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include { FASTQC } from '../main.nf'
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/*
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/*
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@ -1,2 +1,20 @@
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docker.enabled = true
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params {
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outdir = "output/"
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publish_dir_mode = "copy"
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conda = false
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}
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profiles {
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conda {
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params.conda = true
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}
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docker {
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docker.enabled = true
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docker.runOptions = '-u \$(id -u):\$(id -g)'
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}
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singularity {
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singularity.enabled = true
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singularity.autoMounts = true
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}
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}
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