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Trying to fix markdown linting

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FelixKrueger 2020-07-15 15:59:17 +01:00
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tests/data/fastq/methylated_dna/bisulfite-seq_test_data.md
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### E. coli paired-end test dataset for Bisulfite-seq applications
# E. coli paired-end test dataset for Bisulfite-seq applications
The E. coli data set was generated using [Sherman](https://github.com/FelixKrueger/Sherman) as 10,000 reads of paired-end data, with average methylation levels of 80% in CpG context, and 10% in non-CG context. The files can be found in the folder: genaral/fastq/dna, and are called:
```
Ecoli_10K_methylated_R1.fastq.gz
Ecoli_10K_methylated_R2.fastq.gz
```
`Ecoli_10K_methylated_R1.fastq.gz`
`Ecoli_10K_methylated_R2.fastq.gz`
```bash
Sherman --non_dir --genome /bi/scratch/Genomes/E_coli/ --paired -n 10000 -l 100 --CG 20 --CH 90