diff --git a/software/bedtools/complement/meta.yml b/software/bedtools/complement/meta.yml
index 69b94259..d85d6a3d 100644
--- a/software/bedtools/complement/meta.yml
+++ b/software/bedtools/complement/meta.yml
@@ -7,8 +7,8 @@ tools:
     - bedtools:
         description: |
             A set of tools for genomic analysis tasks, specifically enabling genome arithmetic (merge, count, complement) on various file types.
-        documentation: https://bedtools.readthedocs.io/en/latest/
-        
+        documentation: https://bedtools.readthedocs.io/en/latest/content/tools/complement.html
+
 params:
     - outdir:
         type: string
@@ -54,4 +54,4 @@ output:
 
 authors:
     -"@Emiller88"
-    -"@sruthipsuresh"
\ No newline at end of file
+    -"@sruthipsuresh"
diff --git a/software/bedtools/genomecov/meta.yml b/software/bedtools/genomecov/meta.yml
index 045a1319..02430948 100644
--- a/software/bedtools/genomecov/meta.yml
+++ b/software/bedtools/genomecov/meta.yml
@@ -8,8 +8,8 @@ tools:
     - bedtools:
         description: |
             A set of tools for genomic analysis tasks, specifically enabling genome arithmetic (merge, count, complement) on various file types.
-        documentation: https://bedtools.readthedocs.io/en/latest/
-        
+        documentation: https://bedtools.readthedocs.io/en/latest/content/tools/genomecov.html
+
 params:
     - outdir:
         type: string
@@ -55,4 +55,4 @@ output:
 
 authors:
     -"@Emiller88"
-    -"@sruthipsuresh"
\ No newline at end of file
+    -"@sruthipsuresh"
diff --git a/software/bedtools/intersect/read.yml b/software/bedtools/intersect/meta.yml
similarity index 96%
rename from software/bedtools/intersect/read.yml
rename to software/bedtools/intersect/meta.yml
index 5bfaaf46..b6e5e91c 100644
--- a/software/bedtools/intersect/read.yml
+++ b/software/bedtools/intersect/meta.yml
@@ -8,7 +8,7 @@ tools:
     - bedtools:
         description: |
             A set of tools for genomic analysis tasks, specifically enabling genome arithmetic (merge, count, complement) on various file types.
-        documentation: https://bedtools.readthedocs.io/en/latest/
+        documentation: https://bedtools.readthedocs.io/en/latest/content/tools/intersect.html
 
 params:
     - outdir:
@@ -52,7 +52,7 @@ output:
         type: file
         description: File containing software version
         pattern: "*.{version.txt}"
-        
+
 authors:
     -"@Emiller88"
-    -"@sruthipsuresh"
\ No newline at end of file
+    -"@sruthipsuresh"
diff --git a/software/bedtools/merge/meta.yml b/software/bedtools/merge/meta.yml
index dcd952bd..50fc979d 100644
--- a/software/bedtools/merge/meta.yml
+++ b/software/bedtools/merge/meta.yml
@@ -8,7 +8,7 @@ tools:
     - bedtools:
         description: |
             A set of tools for genomic analysis tasks, specifically enabling genome arithmetic (merge, count, complement) on various file types.
-        documentation: https://bedtools.readthedocs.io/en/latest/
+        documentation: https://bedtools.readthedocs.io/en/latest/content/tools/merge.html
 
 params:
     - outdir:
@@ -52,7 +52,7 @@ output:
         type: file
         description: File containing software version
         pattern: "*.{version.txt}"
-        
+
 authors:
     -"@Emiller88"
-    -"@sruthipsuresh"
\ No newline at end of file
+    -"@sruthipsuresh"
diff --git a/software/bedtools/slop/meta.yml b/software/bedtools/slop/meta.yml
index 2f531430..4f8b9840 100644
--- a/software/bedtools/slop/meta.yml
+++ b/software/bedtools/slop/meta.yml
@@ -7,7 +7,7 @@ tools:
   - bedtools:
       description: |
         A set of tools for genomic analysis tasks, specifically enabling genome arithmetic (merge, count, complement) on various file types.
-      documentation: https://bedtools.readthedocs.io/en/latest/
+      documentation: https://bedtools.readthedocs.io/en/latest/content/tools/slop.html
 
 params:
   - l:
diff --git a/software/bedtools/sort/meta.yml b/software/bedtools/sort/meta.yml
index 4216a7c1..eccf2806 100644
--- a/software/bedtools/sort/meta.yml
+++ b/software/bedtools/sort/meta.yml
@@ -8,7 +8,7 @@ tools:
     - bedtools:
         description: |
             A set of tools for genomic analysis tasks, specifically enabling genome arithmetic (merge, count, complement) on various file types.
-        documentation: https://bedtools.readthedocs.io/en/latest/
+        documentation: https://bedtools.readthedocs.io/en/latest/content/tools/sort.html
 
 params:
     - outdir:
@@ -52,7 +52,7 @@ output:
         type: file
         description: File containing software version
         pattern: "*.{version.txt}"
-        
+
 authors:
     -"@Emiller88"
-    -"@sruthipsuresh"
\ No newline at end of file
+    -"@sruthipsuresh"