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Better error message for FileNotFoundErrors (#755)
* Better error message for FileNotFoundErrors * Update tests/test_versions_yml.py Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> * Update test_versions_yml.py Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>
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1 changed files with 20 additions and 2 deletions
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@ -2,6 +2,7 @@ from pathlib import Path
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import pytest
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import pytest
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import yaml
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import yaml
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import re
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import re
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from textwrap import dedent
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def _get_workflow_names():
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def _get_workflow_names():
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@ -21,7 +22,22 @@ def _get_workflow_names():
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def test_ensure_valid_version_yml(workflow_dir):
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def test_ensure_valid_version_yml(workflow_dir):
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workflow_dir = Path(workflow_dir)
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workflow_dir = Path(workflow_dir)
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software_name = workflow_dir.name.split("_")[0].lower()
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software_name = workflow_dir.name.split("_")[0].lower()
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versions_yml = (workflow_dir / f"output/{software_name}/versions.yml").read_text()
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try:
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versions_yml_file = workflow_dir / f"output/{software_name}/versions.yml"
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versions_yml = versions_yml_file.read_text()
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except FileNotFoundError:
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raise AssertionError(
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dedent(
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f"""\
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`versions.yml` not found in the output directory.
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Expected path: `{versions_yml_file}`
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This can have multiple reasons:
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* The test-workflow failed before a `versions.yml` could be generated.
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* The workflow name in `test.yml` does not start with the tool name.
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"""
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)
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)
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assert (
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assert (
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"END_VERSIONS" not in versions_yml
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"END_VERSIONS" not in versions_yml
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@ -29,7 +45,9 @@ def test_ensure_valid_version_yml(workflow_dir):
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# Raises an exception if yaml is not valid
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# Raises an exception if yaml is not valid
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versions = yaml.safe_load(versions_yml)
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versions = yaml.safe_load(versions_yml)
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assert len(versions) == 1, "The top-level of versions.yml must contain exactely one entry: the process name as dict key"
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assert (
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len(versions) == 1
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), "The top-level of versions.yml must contain exactly one entry: the process name as dict key"
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software_versions = next(iter(versions.values()))
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software_versions = next(iter(versions.values()))
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assert len(software_versions), "There must be at least one version emitted."
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assert len(software_versions), "There must be at least one version emitted."
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for tool, version in software_versions.items():
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for tool, version in software_versions.items():
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