From 5758e9f451e2eb089e777f398c2ec32cff28b3d2 Mon Sep 17 00:00:00 2001 From: "James A. Fellows Yates" Date: Wed, 22 Sep 2021 12:02:32 +0200 Subject: [PATCH] Unzip update (#730) * Specify more guidelines on input channels * Linting * Updates based on code review * Update README.md * Fix broken sentence * Change test dataset --- tests/modules/unzip/main.nf | 2 +- tests/modules/unzip/test.yml | 7 +++++-- 2 files changed, 6 insertions(+), 3 deletions(-) diff --git a/tests/modules/unzip/main.nf b/tests/modules/unzip/main.nf index b7f668b1..b5b208be 100644 --- a/tests/modules/unzip/main.nf +++ b/tests/modules/unzip/main.nf @@ -6,7 +6,7 @@ include { UNZIP } from '../../../modules/unzip/main.nf' addParams( options: [:] workflow test_unzip { - archive = file(params.test_data['sarscov2']['genome']['genome_fasta_zip'], checkIfExists: true) + archive = file(params.test_data['sarscov2']['genome']['ncbi_taxmap_zip'], checkIfExists: true) UNZIP ( archive ) } diff --git a/tests/modules/unzip/test.yml b/tests/modules/unzip/test.yml index 93066eb0..1b0b1a97 100644 --- a/tests/modules/unzip/test.yml +++ b/tests/modules/unzip/test.yml @@ -3,5 +3,8 @@ tags: - unzip files: - - path: output/unzip/genome.fasta/genome.fasta - md5sum: 6e9fe4042a72f2345f644f239272b7e6 + - path: output/unzip/ncbi_taxmap/ + - path: output/unzip/ncbi_taxmap/ncbi.map + md5sum: de30dbba85f9070612b632e2a5a95952 + - path: output/unzip/ncbi_taxmap/ncbi.tre + md5sum: 4029dd2091c685b9a86ddd9d0d870db0