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added optional pdf/png outputs
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@ -80,6 +80,14 @@ output:
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type: file
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type: file
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description: File containing copy number segment information
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description: File containing copy number segment information
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pattern: "*.{cns}"
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pattern: "*.{cns}"
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- pdf:
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type: file
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description: File with plot of copy numbers or segments on chromosomes
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pattern: "*.{pdf}"
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- png:
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type: file
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description: File with plot of bin-level log2 coverages and segmentation calls
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pattern: "*.{png}"
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- versions:
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- versions:
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type: file
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type: file
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description: File containing software versions
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description: File containing software versions
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@ -91,3 +99,4 @@ authors:
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- "@drpatelh"
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- "@drpatelh"
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- "@fbdtemme"
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- "@fbdtemme"
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- "@lassefolkersen"
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- "@lassefolkersen"
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- "@SusiJo"
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