diff --git a/modules/preseq/lcextrap/main.nf b/modules/preseq/lcextrap/main.nf index d6dd19e2..2254c5de 100644 --- a/modules/preseq/lcextrap/main.nf +++ b/modules/preseq/lcextrap/main.nf @@ -12,9 +12,9 @@ process PRESEQ_LCEXTRAP { tuple val(meta), path(bam) output: - tuple val(meta), path("*.ccurve.txt"), emit: ccurve - tuple val(meta), path("*.log") , emit: log - path "versions.yml" , emit: versions + tuple val(meta), path("*.lc_extrap.txt"), emit: lc_extrap + tuple val(meta), path("*.log") , emit: log + path "versions.yml" , emit: versions when: task.ext.when == null || task.ext.when @@ -28,7 +28,7 @@ process PRESEQ_LCEXTRAP { lc_extrap \\ $args \\ $paired_end \\ - -output ${prefix}.ccurve.txt \\ + -output ${prefix}.lc_extrap.txt \\ $bam cp .command.err ${prefix}.command.log diff --git a/tests/modules/preseq/lcextrap/test.yml b/tests/modules/preseq/lcextrap/test.yml index ecd1d046..f5b5aea4 100644 --- a/tests/modules/preseq/lcextrap/test.yml +++ b/tests/modules/preseq/lcextrap/test.yml @@ -4,7 +4,7 @@ - preseq - preseq/lcextrap files: - - path: output/preseq/test.ccurve.txt + - path: output/preseq/test.lc_extrap.txt md5sum: 1fa5cdd601079329618f61660bee00de - path: output/preseq/test.command.log @@ -14,6 +14,6 @@ - preseq - preseq/lcextrap files: - - path: output/preseq/test.ccurve.txt + - path: output/preseq/test.lc_extrap.txt md5sum: 10e5ea860e87fb6f5dc10f4f20c62040 - path: output/preseq/test.command.log