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Jill V. Hagey, PhD 2022-04-28 12:29:39 -04:00 committed by GitHub
parent b0c5f9422b
commit 5be6afd6b1
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1 changed files with 2 additions and 2 deletions
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modules/srst2/srst2/main.nf
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@ -4,8 +4,8 @@ process SRST2_SRST2 {
conda (params.enable_conda ? "bioconda::srst2=0.2.0" : null)
container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?
'https://depot.galaxyproject.org/singularity/srst2%3A0.2.0--py_4':
'quay.io/biocontainers/srst2:0.2.0--py_4'}"
'https://depot.galaxyproject.org/singularity/srst2%3A0.2.0--py27_2':
'quay.io/biocontainers/srst2:0.2.0--py27_2'}"
input:
tuple val(meta), path(fastq_s), path(db)