From 5de4c86bac62c7e722ddd6c22ec0b21e9341f277 Mon Sep 17 00:00:00 2001
From: JoseEspinosa <kadomu@gmail.com>
Date: Fri, 6 Mar 2020 12:02:40 +0100
Subject: [PATCH] symlink working? (github actions error)

---
 .github/workflows/tcoffee.yml | 3 +++
 1 file changed, 3 insertions(+)

diff --git a/.github/workflows/tcoffee.yml b/.github/workflows/tcoffee.yml
index bc589051..d24596aa 100644
--- a/.github/workflows/tcoffee.yml
+++ b/.github/workflows/tcoffee.yml
@@ -19,6 +19,9 @@ jobs:
           git submodule sync --recursive
           git -c "http.extraheader=$auth_header" -c protocol.version=2 submodule update --init --force --recursive --depth=1
           ls -la test-datasets/tools/tcoffee/input/
+          echo "============"
+          rm ./test-datasets/tools/tcoffee/input/BBA0001.tfa
+          cp test-datasets/general/fasta/msa/BBA0001.tfa ./test-datasets/tools/tcoffee/input/
 
     - name: Install Nextflow
       run: |