millironx/nf-core_modules
1
0
Fork 0
mirror of https://github.com/MillironX/nf-core_modules.git synced 2024-12-22 11:08:17 +00:00
Code Issues Releases Packages Activity

fix: update seqkit to 0.16.0 (#581)

Browse source
This commit is contained in:
Maxime U. Garcia 2021-07-16 11:54:21 +02:00 committed by GitHub
parent b3c4667732
commit 65ab646870
No known key found for this signature in database
GPG key ID: 4AEE18F83AFDEB23
1 changed files with 3 additions and 3 deletions
Show stats Download patch file Download diff file Expand all files Collapse all files

6
modules/seqkit/split2/main.nf
View file

@ -12,12 +12,12 @@ process SEQKIT_SPLIT2 {
mode: params.publish_dir_mode, mode: params.publish_dir_mode,
saveAs: { filename -> saveFiles(filename:filename, options:params.options, publish_dir:getSoftwareName(task.process), meta:meta, publish_by_meta:['id']) } saveAs: { filename -> saveFiles(filename:filename, options:params.options, publish_dir:getSoftwareName(task.process), meta:meta, publish_by_meta:['id']) }
conda (params.enable_conda ? "bioconda::seqkit=0.15.0" : null) conda (params.enable_conda ? "bioconda::seqkit=0.16.0" : null)
if (workflow.containerEngine == 'singularity' && !params.singularity_pull_docker_container) { if (workflow.containerEngine == 'singularity' && !params.singularity_pull_docker_container) {
container "https://depot.galaxyproject.org/singularity/seqkit:0.15.0--0" container "https://depot.galaxyproject.org/singularity/seqkit:0.16.0--h9ee0642_0"
} else { } else {
container "quay.io/biocontainers/seqkit:0.15.0--0" container "quay.io/biocontainers/seqkit:0.16.0--h9ee0642_0"
} }
input: input: