diff --git a/modules/gatk4/haplotypecaller/main.nf b/modules/gatk4/haplotypecaller/main.nf index 57f69ecd..2cd9e7d4 100644 --- a/modules/gatk4/haplotypecaller/main.nf +++ b/modules/gatk4/haplotypecaller/main.nf @@ -17,7 +17,7 @@ process GATK4_HAPLOTYPECALLER { output: tuple val(meta), path("*.vcf.gz"), emit: vcf - tuple val(meta), path("*.tbi") , emit: tbi + tuple val(meta), path("*.tbi") , optional:true, emit: tbi path "versions.yml" , emit: versions when: