diff --git a/modules/gffread/main.nf b/modules/gffread/main.nf index 6c5aecbc..7c024109 100644 --- a/modules/gffread/main.nf +++ b/modules/gffread/main.nf @@ -28,7 +28,7 @@ process GFFREAD { script: def software = getSoftwareName(task.process) """ - gffread $gff $options.args -o ${gff.baseName}.gtf + gffread $gff $options.args -o ${gff.baseName}.out.gtf echo \$(gffread --version 2>&1) > ${software}.version.txt """ }