From 6e83196634582e7a70dc1ab52e293e26f80c7acc Mon Sep 17 00:00:00 2001 From: carpanz Date: Mon, 2 May 2022 18:20:36 +0200 Subject: [PATCH] updating test yml after removing kronadb from test --- tests/modules/krona/ktimporttaxonomy/test.yml | 18 ++++-------------- 1 file changed, 4 insertions(+), 14 deletions(-) diff --git a/tests/modules/krona/ktimporttaxonomy/test.yml b/tests/modules/krona/ktimporttaxonomy/test.yml index f9d4c91a..64ec948e 100644 --- a/tests/modules/krona/ktimporttaxonomy/test.yml +++ b/tests/modules/krona/ktimporttaxonomy/test.yml @@ -1,31 +1,21 @@ - name: krona ktimporttaxonomy test_krona_ktimporttaxonomy_reads command: nextflow run tests/modules/krona/ktimporttaxonomy -entry test_krona_ktimporttaxonomy_reads -c tests/config/nextflow.config tags: - - krona/ktimporttaxonomy - krona + - krona/ktimporttaxonomy files: - - path: output/download/taxonomy/taxonomy.tab - md5sum: 0d13b5b3838f12d1f51827464345e0f0 - - path: output/download/versions.yml - md5sum: 5bf3137779303fb36e4c5373704a4bb6 - path: output/taxonomy/taxonomy.krona.html - contains: - - "DOCTYPE html PUBLIC" + contains: '[ # TODO nf-core: file md5sum was variable, please replace this text with a string found in the file instead ]' - path: output/taxonomy/versions.yml md5sum: ea32399c9fd3bc1d4fc1081cb3a345d5 - name: krona ktimporttaxonomy test_krona_ktimporttaxonomy_report command: nextflow run tests/modules/krona/ktimporttaxonomy -entry test_krona_ktimporttaxonomy_report -c tests/config/nextflow.config tags: - - krona/ktimporttaxonomy - krona + - krona/ktimporttaxonomy files: - - path: output/download/taxonomy/taxonomy.tab - md5sum: 0d13b5b3838f12d1f51827464345e0f0 - - path: output/download/versions.yml - md5sum: ea7720c3555ad61eb06b46454c87407e - path: output/taxonomy/taxonomy.krona.html - contains: - - "DOCTYPE html PUBLIC" + contains: '[ # TODO nf-core: file md5sum was variable, please replace this text with a string found in the file instead ]' - path: output/taxonomy/versions.yml md5sum: 4d46e08ff46dbd1e7075b93903b72400