From 723279c25e26cc7e9f10a08164d2079cd1abd673 Mon Sep 17 00:00:00 2001 From: Chris Cheshire Date: Fri, 26 Jun 2020 08:17:45 +0100 Subject: [PATCH] luslab-umitools | Simplified docker file --- tools/umi_tools/Dockerfile | 9 +-------- 1 file changed, 1 insertion(+), 8 deletions(-) diff --git a/tools/umi_tools/Dockerfile b/tools/umi_tools/Dockerfile index fa74b315..691f576f 100644 --- a/tools/umi_tools/Dockerfile +++ b/tools/umi_tools/Dockerfile @@ -2,14 +2,7 @@ FROM nfcore/base:1.7 LABEL authors="chris.cheshire@crick.ac.uk" \ description="Docker image containing all requirements for the nf-core umi_tools module" -# Install apt packages -RUN apt-get update \ - && apt-get install -y --no-install-recommends \ - procps=2:3.3.15-2 \ - && apt-get clean \ - && rm -rf /var/lib/apt/lists/* - # Install conda packages COPY environment.yml / RUN conda env create -f /environment.yml && conda clean -a -ENV PATH /opt/conda/envs/nfcore-module-umitools/bin:$PATH +ENV PATH /opt/conda/envs/nfcore-module-umitools/bin:$PATH \ No newline at end of file