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Update stringtie version

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drpatelh 2020-10-12 15:55:07 +01:00
parent f4f96ff792
commit 74f27803b4
1 changed files with 3 additions and 3 deletions
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software/stringtie/main.nf
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@ -8,10 +8,10 @@ process STRINGTIE {
mode: params.publish_dir_mode, mode: params.publish_dir_mode,
saveAs: { filename -> saveFiles(filename:filename, options:options, publish_dir:getSoftwareName(task.process), publish_id:meta.id) } saveAs: { filename -> saveFiles(filename:filename, options:options, publish_dir:getSoftwareName(task.process), publish_id:meta.id) }
container "quay.io/biocontainers/stringtie:2.1.2--h7e0af3c_1" container "quay.io/biocontainers/stringtie:2.1.4--h7e0af3c_0"
//container "https://depot.galaxyproject.org/singularity/stringtie:2.1.2--h7e0af3c_1" //container "https://depot.galaxyproject.org/singularity/stringtie:2.1.4--h7e0af3c_0"
conda (params.conda ? "bioconda::stringtie=2.1.2" : null) conda (params.conda ? "bioconda::stringtie=2.1.4" : null)
input: input:
tuple val(meta), path(bam) tuple val(meta), path(bam)