From 7536b386a598ae11a7235f60f0f054518cc867d3 Mon Sep 17 00:00:00 2001 From: JoseEspinosa Date: Tue, 9 Feb 2021 17:56:01 +0100 Subject: [PATCH] Correct channel declaration on bedtools_maskfasta --- tests/software/bedtools/maskfasta/main.nf | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/tests/software/bedtools/maskfasta/main.nf b/tests/software/bedtools/maskfasta/main.nf index 11901636..c0434879 100644 --- a/tests/software/bedtools/maskfasta/main.nf +++ b/tests/software/bedtools/maskfasta/main.nf @@ -5,7 +5,7 @@ nextflow.enable.dsl = 2 include { BEDTOOLS_MASKFASTA } from '../../../../software/bedtools/maskfasta/main.nf' addParams( options: [:] ) workflow test_bedtools_maskfasta { - def input,fasta = [] + def bed,fasta = [] bed = [ [ id:'test'], file("${launchDir}/tests/data/bed/C.bed", checkIfExists: true) ] fasta = [ file("${launchDir}/tests/data/fasta/E_coli/NC_010473.fa", checkIfExists: true) ]