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rseqc - add build to conda definition

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drpatelh 2021-02-03 09:18:20 +00:00
parent 383d35bc7d
commit 773d4d89f2
7 changed files with 7 additions and 7 deletions
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2
software/rseqc/bamstat/main.nf
View file

@ -11,7 +11,7 @@ process RSEQC_BAMSTAT {
mode: params.publish_dir_mode,
saveAs: { filename -> saveFiles(filename:filename, options:params.options, publish_dir:getSoftwareName(task.process), publish_id:meta.id) }
conda (params.enable_conda ? "bioconda::rseqc=3.0.1" : null)
conda (params.enable_conda ? "bioconda::rseqc=3.0.1=py37h516909a_1" : null)
if (workflow.containerEngine == 'singularity' && !params.singularity_pull_docker_container) {
container "https://depot.galaxyproject.org/singularity/rseqc:3.0.1--py37h516909a_1"
} else {

2
software/rseqc/inferexperiment/main.nf
View file

@ -11,7 +11,7 @@ process RSEQC_INFEREXPERIMENT {
mode: params.publish_dir_mode,
saveAs: { filename -> saveFiles(filename:filename, options:params.options, publish_dir:getSoftwareName(task.process), publish_id:meta.id) }
conda (params.enable_conda ? "bioconda::rseqc=3.0.1" : null)
conda (params.enable_conda ? "bioconda::rseqc=3.0.1=py37h516909a_1" : null)
if (workflow.containerEngine == 'singularity' && !params.singularity_pull_docker_container) {
container "https://depot.galaxyproject.org/singularity/rseqc:3.0.1--py37h516909a_1"
} else {

2
software/rseqc/innerdistance/main.nf
View file

@ -11,7 +11,7 @@ process RSEQC_INNERDISTANCE {
mode: params.publish_dir_mode,
saveAs: { filename -> saveFiles(filename:filename, options:params.options, publish_dir:getSoftwareName(task.process), publish_id:meta.id) }
conda (params.enable_conda ? "bioconda::rseqc=3.0.1" : null)
conda (params.enable_conda ? "bioconda::rseqc=3.0.1=py37h516909a_1" : null)
if (workflow.containerEngine == 'singularity' && !params.singularity_pull_docker_container) {
container "https://depot.galaxyproject.org/singularity/rseqc:3.0.1--py37h516909a_1"
} else {

2
software/rseqc/junctionannotation/main.nf
View file

@ -11,7 +11,7 @@ process RSEQC_JUNCTIONANNOTATION {
mode: params.publish_dir_mode,
saveAs: { filename -> saveFiles(filename:filename, options:params.options, publish_dir:getSoftwareName(task.process), publish_id:meta.id) }
conda (params.enable_conda ? "bioconda::rseqc=3.0.1" : null)
conda (params.enable_conda ? "bioconda::rseqc=3.0.1=py37h516909a_1" : null)
if (workflow.containerEngine == 'singularity' && !params.singularity_pull_docker_container) {
container "https://depot.galaxyproject.org/singularity/rseqc:3.0.1--py37h516909a_1"
} else {

2
software/rseqc/junctionsaturation/main.nf
View file

@ -11,7 +11,7 @@ process RSEQC_JUNCTIONSATURATION {
mode: params.publish_dir_mode,
saveAs: { filename -> saveFiles(filename:filename, options:params.options, publish_dir:getSoftwareName(task.process), publish_id:meta.id) }
conda (params.enable_conda ? "bioconda::rseqc=3.0.1" : null)
conda (params.enable_conda ? "bioconda::rseqc=3.0.1=py37h516909a_1" : null)
if (workflow.containerEngine == 'singularity' && !params.singularity_pull_docker_container) {
container "https://depot.galaxyproject.org/singularity/rseqc:3.0.1--py37h516909a_1"
} else {

2
software/rseqc/readdistribution/main.nf
View file

@ -11,7 +11,7 @@ process RSEQC_READDISTRIBUTION {
mode: params.publish_dir_mode,
saveAs: { filename -> saveFiles(filename:filename, options:params.options, publish_dir:getSoftwareName(task.process), publish_id:meta.id) }
conda (params.enable_conda ? "bioconda::rseqc=3.0.1" : null)
conda (params.enable_conda ? "bioconda::rseqc=3.0.1=py37h516909a_1" : null)
if (workflow.containerEngine == 'singularity' && !params.singularity_pull_docker_container) {
container "https://depot.galaxyproject.org/singularity/rseqc:3.0.1--py37h516909a_1"
} else {

2
software/rseqc/readduplication/main.nf
View file

@ -11,7 +11,7 @@ process RSEQC_READDUPLICATION {
mode: params.publish_dir_mode,
saveAs: { filename -> saveFiles(filename:filename, options:params.options, publish_dir:getSoftwareName(task.process), publish_id:meta.id) }
conda (params.enable_conda ? "bioconda::rseqc=3.0.1" : null)
conda (params.enable_conda ? "bioconda::rseqc=3.0.1=py37h516909a_1" : null)
if (workflow.containerEngine == 'singularity' && !params.singularity_pull_docker_container) {
container "https://depot.galaxyproject.org/singularity/rseqc:3.0.1--py37h516909a_1"
} else {