diff --git a/README.md b/README.md index f8ffe9e5..ee24b885 100644 --- a/README.md +++ b/README.md @@ -22,7 +22,7 @@ A repository for hosting Nextflow [`DSL2`](https://www.nextflow.io/docs/latest/d ## Using existing modules -We have written a helper command in the `nf-core/tools` package that allows you to install any module present in the `software/` directory of this repository: +We have written a helper command in the `nf-core/tools` package that uses the GitHub API to obtain the relevant information for the module files present in the `software/` directory of this repository. This includes using `git` commit hashes to track changes for reproducibility purposes, and to download and install all of the relevant module files. 1. [Install](https://github.com/nf-core/tools#installation) the latest version of `nf-core/tools` (`>=1.10.2`) 2. List the available modules: @@ -84,7 +84,7 @@ We have written a helper command in the `nf-core/tools` package that allows you update Update one or all software wrapper modules. (NOT YET IMPLEMENTED) remove Remove a software wrapper from a pipeline. (NOT YET IMPLEMENTED) check Check that imported module code has not been modified. (NOT YET IMPLEMENTED) -``` + ``` ### Configuration and parameters