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Add gff to meta yaml

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Anders Goncalves da Silva 2021-02-15 20:49:37 -08:00
parent c12a558f15
commit 7cae9b1842
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1 changed files with 5 additions and 1 deletions
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software/ivar/variants/meta.yml
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@ -45,13 +45,17 @@ input:
type: file
description: The reference sequence used for mapping and generating the BAM file
pattern: "*.fa"
- gff:
type: file
description: A GFF file in the GFF3 format can be supplied to specify coordinates of open reading frames (ORFs). In absence of GFF file, amino acid translation will not be done.
patter: "*.gff"
output:
- meta:
type: map
description: |
Groovy Map containing sample information
e.g. [ id:'test', single_end:false ]
- variants:
- tsv:
type: file
description: iVar generated TSV file with the variants
pattern: "*.tsv"