make prettier

This commit is contained in:
Robert A. Petit III 2022-05-11 18:00:36 +00:00
parent ef2996e4a5
commit 7ced6e20de

View file

@ -1,8 +1,9 @@
- name: snippy run test_snippy_run
command: nextflow run tests/modules/snippy/run -entry test_snippy_run -c tests/config/nextflow.config -c tests/modules/snippy/run/nextflow.config
command: |
nextflow run tests/modules/snippy/run -entry test_snippy_run -c tests/config/nextflow.config -c tests/modules/snippy/run/nextflow.config
tags:
- snippy
- snippy/run
- snippy
files:
- path: output/snippy/test/test.aligned.fa
md5sum: 47e3390d4167edf1955d162d37aca5e3
@ -16,21 +17,21 @@
- path: output/snippy/test/test.csv
md5sum: 322f942115e5945c2041a88246166703
- path: output/snippy/test/test.filt.vcf
contains: ['fileformat', 'freebayes', 'CHROM']
contains: ["fileformat", "freebayes", "CHROM"]
- path: output/snippy/test/test.gff
md5sum: df19e1b84ba6f691d20c72b397c88abf
- path: output/snippy/test/test.html
md5sum: 1ccbf0ffcadae1a6b2e11681d24c9938
- path: output/snippy/test/test.log
contains: ['snippy', 'consensus', 'subs']
contains: ["snippy", "consensus", "subs"]
- path: output/snippy/test/test.raw.vcf
contains: ['fileformat', 'freebayes', 'CHROM']
contains: ["fileformat", "freebayes", "CHROM"]
- path: output/snippy/test/test.tab
md5sum: beb9bde3bce985e53e8feba9ec5b136e
- path: output/snippy/test/test.txt
contains: ['DateTime', 'ReadFiles', 'VariantTotal']
contains: ["DateTime", "ReadFiles", "VariantTotal"]
- path: output/snippy/test/test.vcf
contains: ['fileformat', 'freebayes', 'CHROM']
contains: ["fileformat", "freebayes", "CHROM"]
- path: output/snippy/test/test.vcf.gz
- path: output/snippy/test/test.vcf.gz.csi
md5sum: bed9fa291c220a1ba04eb2d448932ffc