update nextflow.config withName

This commit is contained in:
Carpanzano 2022-05-02 16:22:22 +02:00
parent 42310cbce2
commit 80f107515e

View file

@ -12,7 +12,7 @@ workflow test_krona_ktimporttaxonomy_reads {
input = [
[ id:'test', single_end:false ], // meta map
file(params.test_data['sarscov2']['metagenome']['test_1.kraken2.reads.txt'], checkIfExists: true)
file(params.test_data['sarscov2']['metagenome']['classified_reads_assignment'], checkIfExists: true)
]
// taxonomy = file(params.test_data['generic']['txt']['hello'], checkIfExists: true)
@ -24,7 +24,7 @@ workflow test_krona_ktimporttaxonomy_report {
input = [
[ id:'test', single_end:false ], // meta map
file(params.test_data['sarscov2']['metagenome']['test_1.kraken2.report.txt'], checkIfExists: true)
file(params.test_data['sarscov2']['metagenome']['report'], checkIfExists: true)
]
taxonomy = file(params.test_data['generic']['txt']['hello'], checkIfExists: true)