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This commit is contained in:
Nicolas Vannieuwkerke 2022-06-01 09:20:20 +02:00
parent d4f3df4677
commit 8470f3cb7e
1 changed files with 3 additions and 9 deletions
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12
tests/modules/gatk4/composestrtablefile/main.nf
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@ -6,17 +6,11 @@ include { GATK4_COMPOSESTRTABLEFILE } from '../../../../modules/gatk4/composestr
workflow test_gatk4_composestrtablefile {
fasta = [
file(params.test_data['homo_sapiens']['genome']['genome_fasta'], checkIfExists: true)
]
fasta = file(params.test_data['homo_sapiens']['genome']['genome_fasta'], checkIfExists: true)
fasta_fai = [
file(params.test_data['homo_sapiens']['genome']['genome_fasta_fai'], checkIfExists: true)
]
fasta_fai = file(params.test_data['homo_sapiens']['genome']['genome_fasta_fai'], checkIfExists: true)
dict = [
file(params.test_data['homo_sapiens']['genome']['genome_dict'], checkIfExists: true)
]
dict = file(params.test_data['homo_sapiens']['genome']['genome_dict'], checkIfExists: true)
GATK4_COMPOSESTRTABLEFILE ( fasta, fasta_fai, dict )
}