ci(trimgalore): Use pytest-workflow

.github/workflows/software/trimgalore.yml

@@ -17,7 +17,6 @@ jobs:
     env:
       NXF_ANSI_LOG: false
     steps:
-
       - uses: actions/checkout@v2
 
       - name: Install Nextflow
@@ -26,5 +25,12 @@ jobs:
           wget -qO- get.nextflow.io | bash
           sudo mv nextflow /usr/local/bin/
 
+      - name: Set up Python
+        uses: actions/setup-python@v2
+        with:
+          python-version: "3.x"
+      - name: Install dependencies
+        run: python -m pip install --upgrade pip pytest-workflow
+
       # Test the module
-    - run: nextflow run ./software/trimgalore/test/ -profile docker
+      - run: pytest --tag trimgalore --symlink --wt 2