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Fix salmon index tests

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drpatelh 2021-02-03 17:13:47 +00:00
parent 058d7b397c
commit 8a15852756
1 changed files with 1 additions and 1 deletions
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tests/software/salmon/index/main.nf
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@ -2,7 +2,7 @@
nextflow.enable.dsl = 2 nextflow.enable.dsl = 2
include { SALMON_INDEX } from '../../../../software/salmon/index/main.nf' addParams( options: [args: '--minAssignedFrags 1'] ) include { SALMON_INDEX } from '../../../../software/salmon/index/main.nf' addParams( options: [:] )
workflow test_salmon_index { workflow test_salmon_index {
def genome_fasta = file("${launchDir}/tests/data/fasta/sarscov2/GCA_011545545.1_ASM1154554v1_genomic.fna", checkIfExists: true) def genome_fasta = file("${launchDir}/tests/data/fasta/sarscov2/GCA_011545545.1_ASM1154554v1_genomic.fna", checkIfExists: true)