From 8c088d473b952d8e51a56fb44e387b1e3890585f Mon Sep 17 00:00:00 2001
From: sruthipsuresh <sruthiprabhasuresh@gmail.com>
Date: Fri, 18 Dec 2020 08:59:33 -0600
Subject: [PATCH] Corrected bash error, tested process

---
 tests/software/phantompeakqualtools/main.nf | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/tests/software/phantompeakqualtools/main.nf b/tests/software/phantompeakqualtools/main.nf
index 6702c859..25618914 100644
--- a/tests/software/phantompeakqualtools/main.nf
+++ b/tests/software/phantompeakqualtools/main.nf
@@ -7,6 +7,6 @@ include { PHANTOMPEAKQUALTOOLS } from '../../../software/phantompeakqualtools/ma
 workflow test_phantompeakqualtools {
     def input = []
     input = [ [ id:'test', single_end:true ], // meta map
-              [ file("${launchDir}/tests/data/bam/test/test.single_end.sorted.bam", checkIfExists: true) ] ]
+              [ file("${launchDir}/tests/data/bam/test.single_end.sorted.bam", checkIfExists: true) ] ]
     PHANTOMPEAKQUALTOOLS ( input )
 }