diff --git a/tests/software/bcftools/main.nf b/tests/software/bcftools/main.nf index d01cbbf7..fd2b5cf2 100644 --- a/tests/software/bcftools/main.nf +++ b/tests/software/bcftools/main.nf @@ -2,7 +2,8 @@ nextflow.enable.dsl = 2 -include { BCFTOOLS_FILTER } from '../../../software/bcftools/filter/main.nf' addParams( options: [:] ) +//keep arg of bcftools_filter, otherwise md5 will change on each execution +include { BCFTOOLS_FILTER } from '../../../software/bcftools/filter/main.nf' addParams( options: ['args': '--no-version'] ) include { BCFTOOLS_STATS } from '../../../software/bcftools/stats/main.nf' addParams( options: [:] ) include { BCFTOOLS_BGZIP } from '../../../software/bcftools/bgzip/main.nf' addParams( options: [:] ) include { BCFTOOLS_TABIX } from '../../../software/bcftools/tabix/main.nf' addParams( options: [:] ) diff --git a/tests/software/bcftools/test.yml b/tests/software/bcftools/test.yml index 14d305d9..cac17b55 100644 --- a/tests/software/bcftools/test.yml +++ b/tests/software/bcftools/test.yml @@ -5,7 +5,7 @@ - bcftools_filter files: - path: output/bcftools/test.vcf.gz - md5sum: b994e60162fd97c118ddd45b08018d98 + md5sum: 16947ce72a127938d881113a1e6e696b - name: Run bcftools stats test workflow command: nextflow run ./tests/software/bcftools/ -profile docker -entry test_bcftools_stats -c tests/config/nextflow.config