From 9011fc7212ba3889792b5026e883e2f60c714028 Mon Sep 17 00:00:00 2001 From: Thiseas Christos Lamnidis Date: Mon, 23 May 2022 17:08:40 +0200 Subject: [PATCH] Corrected test-datasets input --- tests/modules/sexdeterrmine/main.nf | 2 +- tests/modules/sexdeterrmine/test.yml | 6 +++--- 2 files changed, 4 insertions(+), 4 deletions(-) diff --git a/tests/modules/sexdeterrmine/main.nf b/tests/modules/sexdeterrmine/main.nf index 056c63d5..fc777905 100644 --- a/tests/modules/sexdeterrmine/main.nf +++ b/tests/modules/sexdeterrmine/main.nf @@ -9,7 +9,7 @@ workflow test_sexdeterrmine { input = [ [ id:'test', single_end:false ], // meta map - file(params.test_data['homo_sapiens']['illumina']['test3.single_end.markduplicates.sorted.bam'], checkIfExists: true) ] + file(params.test_data['homo_sapiens']['illumina']['test3_single_end_markduplicates_sorted_bam'], checkIfExists: true) ] SAMTOOLS_DEPTH ( input ) SEXDETERRMINE ( SAMTOOLS_DEPTH.out.tsv, [] ) diff --git a/tests/modules/sexdeterrmine/test.yml b/tests/modules/sexdeterrmine/test.yml index 54c471ba..bb3f701e 100644 --- a/tests/modules/sexdeterrmine/test.yml +++ b/tests/modules/sexdeterrmine/test.yml @@ -4,12 +4,12 @@ - sexdeterrmine files: - path: output/samtools/test.tsv - md5sum: c894abd0c78ea7760e0b54bbafb93722 + md5sum: fa2992ca1ea93a6e1b3e838476191935 - path: output/samtools/versions.yml md5sum: dbd04b700335c8ad236bd667254c8dd8 - path: output/sexdeterrmine/sexdeterrmine.json - md5sum: 16d9e7891d4c92bc1d66db2e70e9d86f + md5sum: bafb2419bb8630eda29a251c20e97166 - path: output/sexdeterrmine/test_sexdet.tsv - md5sum: 7ffc35e478de66939819a9ca4a5df2d7 + md5sum: 1cf8a2b97b38353eb97a96ab872dcca9 - path: output/sexdeterrmine/versions.yml md5sum: 077361101e8e7997aec3da8a01e59eee