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Prokka: Fix typo in variable name (#1846)

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Fix typo in variable name
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Jasmin F 2022-07-04 15:04:59 +02:00 committed by GitHub
parent 60c65fb386
commit 92c420e7d0
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modules/prokka/main.nf
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@ -34,7 +34,7 @@ process PROKKA {
def args = task.ext.args ?: '' def args = task.ext.args ?: ''
prefix = task.ext.prefix ?: "${meta.id}" prefix = task.ext.prefix ?: "${meta.id}"
def proteins_opt = proteins ? "--proteins ${proteins[0]}" : "" def proteins_opt = proteins ? "--proteins ${proteins[0]}" : ""
def prodigal_opt = prodigal_tf ? "--prodigaltf ${prodigal_tf[0]}" : "" def prodigal_tf = prodigal_tf ? "--prodigaltf ${prodigal_tf[0]}" : ""
""" """
prokka \\ prokka \\
$args \\ $args \\