millironx/nf-core_modules
1
0
Fork 0
mirror of https://github.com/MillironX/nf-core_modules.git synced 2024-09-20 23:32:05 +00:00
Code Issues Releases Packages Activity

Prokka: Fix typo in variable name (#1846)

Browse source 
Fix typo in variable name
This commit is contained in:
Jasmin F 2022-07-04 15:04:59 +02:00 committed by GitHub
parent 60c65fb386
commit 92c420e7d0
No known key found for this signature in database
GPG key ID: 4AEE18F83AFDEB23
1 changed files with 1 additions and 1 deletions
Show stats Download patch file Download diff file Expand all files Collapse all files

2
modules/prokka/main.nf
View file

@ -34,7 +34,7 @@ process PROKKA {
def args = task.ext.args ?: '' def args = task.ext.args ?: ''
prefix = task.ext.prefix ?: "${meta.id}" prefix = task.ext.prefix ?: "${meta.id}"
def proteins_opt = proteins ? "--proteins ${proteins[0]}" : "" def proteins_opt = proteins ? "--proteins ${proteins[0]}" : ""
def prodigal_opt = prodigal_tf ? "--prodigaltf ${prodigal_tf[0]}" : "" def prodigal_tf = prodigal_tf ? "--prodigaltf ${prodigal_tf[0]}" : ""
""" """
prokka \\ prokka \\
$args \\ $args \\