From 96d3b0a18b282e5a15600902a01c0273c191bd8a Mon Sep 17 00:00:00 2001 From: Harshil Patel Date: Fri, 12 Feb 2021 23:02:25 +0000 Subject: [PATCH] Update tests/software/ivar/consensus/main.nf --- tests/software/ivar/consensus/main.nf | 4 +--- 1 file changed, 1 insertion(+), 3 deletions(-) diff --git a/tests/software/ivar/consensus/main.nf b/tests/software/ivar/consensus/main.nf index fe82867b..0cc56015 100644 --- a/tests/software/ivar/consensus/main.nf +++ b/tests/software/ivar/consensus/main.nf @@ -3,9 +3,7 @@ nextflow.enable.dsl = 2 params.save_mpileup = true -include { IVAR_CONSENSUS } from '../../../../software/ivar/consensus/main.nf' addParams([ - options: [args2: '-aa -A -d 0 -Q 0'] -]) +include { IVAR_CONSENSUS } from '../../../../software/ivar/consensus/main.nf' addParams( [ options: [args2: '-aa -A -d 0 -Q 0'] ] ) workflow test_ivar_consensus { def ref = file("${launchDir}/tests/data/fasta/sarscov2/MN908947.3.fa", checkIfExists: true)