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Change test files

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This commit is contained in:
Mahesh Binzer-Panchal 2022-05-10 15:02:37 +00:00
parent b875cfb744
commit 9b4923dcd5
2 changed files with 11 additions and 9 deletions
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6
tests/modules/kat/hist/main.nf
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@ -8,7 +8,7 @@ workflow test_kat_hist_single_end {
input = [
[ id:'test', single_end:true ], // meta map
file(params.test_data['homo_sapiens']['illumina']['test_1_fastq_gz'], checkIfExists: true)
file(params.test_data['homo_sapiens']['illumina']['test2_1_fastq_gz'], checkIfExists: true)
]
KAT_HIST ( input )
@ -19,8 +19,8 @@ workflow test_kat_hist_paired_end {
input = [
[ id:'test', single_end:false ], // meta map
[
file(params.test_data['homo_sapiens']['illumina']['test_1_fastq_gz'], checkIfExists: true),
file(params.test_data['homo_sapiens']['illumina']['test_2_fastq_gz'], checkIfExists: true),
file(params.test_data['homo_sapiens']['illumina']['test2_1_fastq_gz'], checkIfExists: true),
file(params.test_data['homo_sapiens']['illumina']['test2_2_fastq_gz'], checkIfExists: true),
]
]

14
tests/modules/kat/hist/test.yml
View file

@ -5,13 +5,14 @@
- kat
files:
- path: output/kat/test.hist
md5sum: 1aceb823b6774f14f5cca15954138efd
md5sum: c6eba52b3a2653a684577a8ae20b74c1
- path: output/kat/test.hist-hash.jf27
- path: output/kat/test.hist.dist_analysis.json
md5sum: ec4317d510f752855411d13c0f24dea9
md5sum: 52a5a2d91c71b940f36f1f0a7fd5ef10
- path: output/kat/test.hist.png
md5sum: 30daaf4d2dd4b1574e387df973c39d03
md5sum: 49861ef1a265e0edde3550b39c64a274
- path: output/kat/versions.yml
md5sum: 296f28c007bc55f8f5490702cf3f81d4
- name: kat hist test_kat_hist_paired_end
command: nextflow run tests/modules/kat/hist -entry test_kat_hist_paired_end -c tests/config/nextflow.config
@ -20,9 +21,10 @@
- kat
files:
- path: output/kat/test.hist
md5sum: c4e8e01996bd8f676e02690220e1def7
md5sum: 91429091e74b1718051591d83a1ccb5d
- path: output/kat/test.hist.dist_analysis.json
md5sum: 954a3d1c3fc56f80f0929315ed299824
md5sum: 8b0dabeaff4ba706b33aa8964d687e13
- path: output/kat/test.hist.png
md5sum: 8a21ce0965342234f5982f947f4f10b0
md5sum: e20774d0d2b979cb6ead7b7fb5ad36d9
- path: output/kat/versions.yml
md5sum: 3a07329af7ce78e76b021996cd08eacb