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test path update

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This commit is contained in:
Rike 2022-05-23 12:53:36 +02:00
parent 3af61cfbbc
commit a8de9fd085
2 changed files with 6 additions and 5 deletions
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10
tests/modules/gatk4/cnnscorevariants/test.yml
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@ -1,10 +1,10 @@
- name: gatk4 cnnscorevariants test_gatk4_cnnscorevariants - name: gatk4 cnnscorevariants test_gatk4_cnnscorevariants
command: nextflow run ./tests/modules/gatk4/cnnscorevariants -entry test_gatk4_cnnscorevariants -c ./tests/config/nextflow.config -c ./tests/modules/gatk4/cnnscorevariants/nextflow.config command: nextflow run ./tests/modules/gatk4/cnnscorevariants -entry test_gatk4_cnnscorevariants -c ./tests/config/nextflow.config -c ./tests/modules/gatk4/cnnscorevariants/nextflow.config
tags: tags:
- gatk4
- gatk4/cnnscorevariants - gatk4/cnnscorevariants
- gatk4
files: files:
- path: output/gatk4/test.vcf.gz - path: output/gatk4/test.cnn.vcf.gz
contains: contains: "##ALT=<ID=NON_REF,Description="
- "##ALT=<ID=NON_REF,Description=" - path: output/gatk4/test.cnn.vcf.gz.tbi
- path: output/gatk4/test.vcf.gz.tbi md5sum: 76eda8249fa285c061e1a32da2ad95d7

1
tests/modules/gatk4/filtervarianttranches/test.yml
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@ -6,3 +6,4 @@
files: files:
- path: output/gatk4/test.filtered.vcf.gz - path: output/gatk4/test.filtered.vcf.gz
- path: output/gatk4/test.filtered.vcf.gz.tbi - path: output/gatk4/test.filtered.vcf.gz.tbi
- path: output/gatk4/versions.yml