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Code Issues Releases Packages Activity

svdb update to 2.6.0 (#1465)

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Ramprasad Neethiraj 2022-03-30 14:50:27 +02:00 committed by GitHub
parent 1ec1868264
commit a973b68200
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2 changed files with 6 additions and 6 deletions
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6
modules/svdb/merge/main.nf
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@ -2,10 +2,10 @@ process SVDB_MERGE {
tag "$meta.id" tag "$meta.id"
label 'process_medium' label 'process_medium'
conda (params.enable_conda ? "bioconda::svdb=2.5.2" : null) conda (params.enable_conda ? "bioconda::svdb=2.6.0" : null)
container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ? container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?
'https://depot.galaxyproject.org/singularity/svdb:2.5.2--py39h5371cbf_0': 'https://depot.galaxyproject.org/singularity/svdb:2.6.0--py39h5371cbf_0':
'quay.io/biocontainers/svdb:2.5.2--py39h5371cbf_0' }" 'quay.io/biocontainers/svdb:2.6.0--py39h5371cbf_0' }"
input: input:
tuple val(meta), path(vcfs) tuple val(meta), path(vcfs)

6
modules/svdb/query/main.nf
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@ -2,10 +2,10 @@ process SVDB_QUERY {
tag "$meta.id" tag "$meta.id"
label 'process_medium' label 'process_medium'
conda (params.enable_conda ? "bioconda::svdb=2.5.2" : null) conda (params.enable_conda ? "bioconda::svdb=2.6.0" : null)
container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ? container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?
'https://depot.galaxyproject.org/singularity/svdb:2.5.2--py39h5371cbf_0': 'https://depot.galaxyproject.org/singularity/svdb:2.6.0--py39h5371cbf_0':
'quay.io/biocontainers/svdb:2.5.2--py39h5371cbf_0' }" 'quay.io/biocontainers/svdb:2.6.0--py39h5371cbf_0' }"
input: input:
tuple val(meta), path(vcf) tuple val(meta), path(vcf)