From aaa088dba88f8c58b2d14c6c4897861cdfcbf77a Mon Sep 17 00:00:00 2001 From: Harshil Patel Date: Tue, 9 Feb 2021 21:34:29 +0000 Subject: [PATCH] Update tests/software/bedtools/getfasta/main.nf --- tests/software/bedtools/getfasta/main.nf | 7 +++---- 1 file changed, 3 insertions(+), 4 deletions(-) diff --git a/tests/software/bedtools/getfasta/main.nf b/tests/software/bedtools/getfasta/main.nf index 3e78a44a..aba2f8e4 100644 --- a/tests/software/bedtools/getfasta/main.nf +++ b/tests/software/bedtools/getfasta/main.nf @@ -5,9 +5,8 @@ nextflow.enable.dsl = 2 include { BEDTOOLS_GETFASTA } from '../../../../software/bedtools/getfasta/main.nf' addParams( options: [:] ) workflow test_bedtools_getfasta { - def bed,fasta = [] - bed = [ file("${launchDir}/tests/data/bed/C.bed", checkIfExists: true) ] - fasta = [ file("${launchDir}/tests/data/fasta/E_coli/NC_010473.fa", checkIfExists: true) ] + def bed = [ file("${launchDir}/tests/data/bed/C.bed", checkIfExists: true) ] + def fasta = [ file("${launchDir}/tests/data/fasta/E_coli/NC_010473.fa", checkIfExists: true) ] - BEDTOOLS_GETFASTA( bed, fasta ) + BEDTOOLS_GETFASTA ( bed, fasta ) }